Pseudomonas yamanorum: AK972_2028
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Entry
AK972_2028 CDS
T05821
Name
(GenBank) ABC-type spermidine/putrescine transport system, permease component I
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_2028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_2028
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AK972_2028
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Motif
Pfam:
BPD_transp_1
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AMW82828
UniProt:
A0A143GFD1
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Position
complement(2242113..2242958)
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AA seq
281 aa
AA seq
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MSRGYLLSLPALVLFFGLLILPLGLTLVLSFNVFDYQVGVKADEWTFAHYLSLFSDSYFY
EIFWRTFWISALVTLLCVVIGVPEAYILSRMGTPWRSIFLILILTPLLISVVVRAFGWSL
LLGADGLVNQVIQALGGKPVKLLYTSFAVIIALVHVMLPFMIIPVWTSLQKLDPSAEQAA
LSLGASQATVMRKIVLPQVMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKMVATVVYDQY
LSELNWPMGATIAVVLLLVNLLIMLSWNRMVEGRYKKSLGV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggctacctgttgtcgttgccggcgctggtgttgtttttcgggctgctgatc
ctgcccctgggcctgacgctggtgctgtcgttcaacgtgttcgactaccaggtgggggtg
aaggccgatgagtggaccttcgcccactacctgtcgctgttcagcgattcgtacttctac
gagatcttctggcgcaccttctggatcagtgccctggtgaccttgctctgcgtggtgatc
ggggtgcccgaggcctacatcctcagccgcatgggcacgccgtggcgctcgatcttcctg
atcctgatcctcaccccgctgctgatttcagtggtggtgcgggcctttggctggagcctg
ctgctgggtgccgatggcctggtgaaccaggtgatccaggccctcggtggcaaaccggtg
aagctgctctacacctcgttcgcggtgatcatcgcactggtgcacgtgatgctgccgttc
atgatcatcccggtgtggacctccctgcagaagctcgacccgtcggcggaacaggcggcg
ctgtccctgggtgccagccaggccacggtgatgcgcaagatcgtgttgccgcaggtaatg
cccggggtgctctccggcaccctgatcgtgtttggcctggccgccagctccttcgcgatc
cccggcctgctgggcgggcgccggctgaagatggtcgccacggtggtgtacgaccaatac
ctctcggaactcaactggcccatgggcgcgaccatcgcggtggtgctgctgttggtcaac
ttgctgatcatgctgagctggaaccgcatggtcgaaggccgctacaaaaagtccctggga
gtataa
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