Pseudomonas yamanorum: AK972_2029
Help
Entry
AK972_2029 CDS
T05821
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_2029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_2029
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AK972_2029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_30
AAA_22
Rad17
AAA
AAA_25
ABC_ATPase
nSTAND3
AAA_19
NB-ARC
nSTAND_NTPase5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AMW82829
LinkDB
All DBs
Position
complement(2242955..2243983)
Genome browser
AA seq
342 aa
AA seq
DB search
MAFLQLNALSKRYGAVDAVVATDLAVEKGEFVSLLGPSGCGKTTTLQMIAGFVDVTGGQI
VLDGRDITHAKPASRGLGVVFQSYALFPHMTVADNVAFGLKMRKVPATEIASRVKTVLEL
VRLAPHAERYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDANLREEMQFEIRRIQ
CEVGITTLMVTHDQAEALSISDRVVVMQAGRVTQIDAPYKLYEHPRTRFISDFVGKANLL
AGDFDQLGAPQLRFEPGNGELTLSLRPEKIDLVAAGSGRLQGTILDSYFFGSQWLYRIKT
RIGELTVVRRNDGSAPLGCGAAVGLDWESSLLRVLAADEVRA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcttttctccaactcaacgccttgagcaaacgctacggcgccgtcgacgcggtggtc
gccactgatcttgcggtggaaaaaggcgagttcgtgtccctgctcggcccctcgggctgc
ggcaagaccaccaccttgcaaatgatcgccggcttcgtcgacgtcaccggtggccagatc
gtcctcgacggtcgcgacatcacccacgccaaacccgccagccgtggcctcggcgtggtg
ttccagagctacgcgctgttcccccacatgacggtggccgacaacgtcgccttcggcctg
aagatgcgcaaggtgcctgccactgagatcgcaagcagagtcaagaccgtgctggaactg
gtgcgcctggcccctcacgccgagcgctacccgcgggaactgtccggcggccagcgccag
cgcgtggccctggcccgcgccctggtgatcgagccgccggtgttgctgctggacgagccc
ctctccaacctcgacgccaacctgcgggaagagatgcagttcgaaatccgccgcatccag
tgcgaagtcgggatcaccaccctgatggtcacccacgatcaggccgaggcgctgtccatc
agcgaccgcgtggtggtgatgcaggccgggcgcgtcacccagatcgacgcgccgtacaaa
ctctatgaacacccgcgcacgcgctttatctcggactttgtcggcaaggccaacctgctg
gcgggcgacttcgatcaactcggcgcgccgcaattgcgcttcgagcccggcaacggcgaa
ctgaccctgagcctgcgcccggaaaagatcgacctggtggccgccggctcagggcgcctg
caaggcacgatcctcgacagctatttcttcggcagccaatggctgtaccgcatcaagacc
cggatcggcgagctgaccgtggtccggcgaaacgacggcagtgcgcccttgggttgcggc
gcggcggtaggcctggactgggagtcgagcctgctgcgggtactggccgccgatgaggtg
cgcgcatga
DBGET
integrated database retrieval system
