Pseudomonas yamanorum: AK972_2176
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Entry
AK972_2176 CDS
T05821
Name
(GenBank) Transcriptional regulatory protein RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_2176
Transcription factors [BR:
pym03000
]
Prokaryotic type
Other transcription factors
Others
AK972_2176
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
AAA_2
AAA_19
AAA_30
AAA_7
ABC_tran
ATPase_2
MCM
IstB_IS21
AAA_33
TniB
AAA_14
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
AMW82976
LinkDB
All DBs
Position
complement(2417149..2418756)
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AA seq
535 aa
AA seq
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MIQKRTVAIGFIGSTLDRVGKGANRWNHWRPSVGLCQQQEVLIDRLELIHGVDARDVSLA
QRVRDDILQVSPETEVRLHPMHLKNPWDFEEVYGALHDFTTNYRFDTDHEDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPARRRNEEERATGTHALIDLDLSRYDRIASRFAHKR
LESLAFLKSGIATRNPAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRSR
HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
LDEQAMLLKAVEEKRFFPLGGDQEVTSDFLIIAGTHRDLRGRVAEGLFREDLYARINLWT
FDLPGLAGRREDIEPNIDFELERHAREQGQVVRFNLEARRRYLAFACSSEAAWLGNFREL
SASITRMATLADSGRIDENQTQEEIDRLRHAWGLASPQNDWLSRLGVDTELDLFDQLQLN
AVIETCLQSDSISDAGRRLFGVSRQAKAQPNDADRLRKYLARFSIEWKQLAELKG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaagcgcacagtcgccattggttttatcggttcaaccctggaccgggtcggc
aaaggcgccaaccgctggaaccattggcggcccagcgtgggcctctgccagcagcaggaa
gtactgattgatcgcctggagctgattcacggcgtcgacgcacgagacgtcagcctggct
cagcgggtacgcgacgacatcctgcaggtatcgccggaaaccgaggtgcggctgcacccc
atgcacctgaagaacccctgggatttcgaggaggtgtacggcgctctgcacgacttcacc
accaactaccgcttcgataccgaccacgaggactacctggtccacatcacgaccggcacc
cacgttgcgcaaatctgctggttcctgctgacggaagcgcgctacctgccagcccgcttg
atccagacgtccccggctcgccgccgcaacgaagaggagcgtgccaccggcacccatgcg
ctgatcgacctcgacctgtcgcgctacgaccgcatcgcatcgcgcttcgcccacaagcgc
ctggaaagcctggccttcctcaaatccggaatcgccacacgcaacccggccttcaaccgc
tccatcgaacagatcgaacgcgtggccgtgcgctccaaggcgccgatgctgctgatcggc
cctaccggtgccggcaagtcattcctcgcgcggcgcatctacgaactcaagcgcagccgg
catcaggtccaggggcgttttgttgaagtgaactgcgccaccttgcgcggcgatggcgcg
atgtcggctctgttcggccatatcaaaggcgccttcaccggcgcccagaacgctcgcgat
ggtttgctgcgcgcggcagatggcggcatgttgttcctggatgagatcggcgagcttggg
ctcgacgaacaggcgatgctgctcaaggccgtcgaagagaaacgcttttttcccctcggt
ggcgaccaggaagtcaccagcgacttcctgatcatcgcaggcacccaccgcgacctgcgc
ggccgcgtcgccgaagggctgttccgcgaagacctgtacgcccggatcaacctctggacc
ttcgacctgccgggcctggccgggcgtcgtgaagacatcgaaccgaacatcgacttcgaa
ctggaacgccatgcccgcgaacaaggccaagtggtgcgcttcaacctcgaagcccggcgg
cgctacctcgcctttgcctgctccagcgaagcggcctggctgggcaactttcgcgaactg
tctgcctccatcacgcgcatggccaccctggcggacagcgggcgcatcgacgaaaaccag
acccaggaagagatcgaccgactgcgtcacgcctggggcctggcgtcgccgcaaaacgat
tggctgtcacgcctgggcgtcgataccgaactggacctgttcgaccagttgcaactcaac
gccgtgatcgaaacatgcctccagtccgacagcatttctgatgccggacgacgcctgttc
ggtgtttcccgacaagccaaggcgcaaccaaacgatgccgaccgactacgcaaatacctg
gcgaggttttcgattgagtggaaacagttggcggagttgaagggctga
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