Pseudomonas yamanorum: AK972_2300
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Entry
AK972_2300 CDS
T05821
Name
(GenBank) Uncharacterized protein ImpJ/VasE
KO
K11893
type VI secretion system protein ImpJ
Organism
pym
Pseudomonas yamanorum
Pathway
pym02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AK972_2300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pym02044
]
AK972_2300
Secretion system [BR:
pym02044
]
Type VI secretion system
Imp/Vas secretion system core components
AK972_2300
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GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AMW83100
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Position
2564431..2565759
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AA seq
442 aa
AA seq
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MRSQKVIWQEGMLLRPQHFQQNDRYHDQQLKRRTQLLCPHGWGFLALEIDVQYLNMGKVV
VSQASGILPDGSLFELDGAMESLVLEVPVNTGKRAIYLALPLATSNCVEARRPEQVDVLA
RYKTLSVGVSDSNAGEDSCRQINCGQLDFRLLLGEQISDQHYVKLKIAQVLSCTEEGVSL
DADFSPTFIHLQGSSYLLSCLKEVISLLACRGDAIAERIRANGTAAGAEVGDFLMLQLIN
RTELVLRHYLGLGQVSPEALYRTLLTILGELATFASDSKRAHFEGHYRHSDQSASFRGLM
EPIRSLLSMVLEQHAIELALQPRQYGILVCPVSDLNLLGSATFILAASAHCDAEELRHRL
PAHLKVGPVERIRELVNLHLAGIKVKPLPVAPRQIPFHATKTYFMLELGARDIEQLKQSG
GFAFHVSGEFAELELKFWAIRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccaaaaagtcatctggcaggaaggcatgctgctgcgccctcagcactttcag
caaaacgatcgttaccacgaccagcaactcaagcgccgcactcagttgttgtgcccccac
ggctggggtttcctggccctggaaatcgatgtgcaatatctcaatatgggcaaggtcgtt
gtcagtcaggccagcggtatattgccggatggcagcctgttcgaactggacggggccatg
gaatcgctggtgctggaggttccggtgaataccggaaaacgggcgatttacctggccttg
ccgctggccacaagtaactgcgttgaggcccgtcgacctgagcaggtcgatgtactcgcg
cgctacaagaccctttcggtaggcgtcagcgattccaacgccggagaagattcctgtcgt
cagataaattgcggacagctggattttcgcctgctgctgggggagcaaatcagcgaccag
cactacgtgaaactcaagattgcccaagtactcagttgcaccgaggagggcgtcagcctg
gatgccgattttagcccgaccttcattcacctgcagggctccagttacctgctgtcgtgc
ctcaaggaggtgatcagcctgcttgcttgccggggggatgccatcgccgagcggatccgc
gccaacggcaccgccgccggagcggaagtcggtgacttcctgatgctgcaactgatcaac
cgcaccgaactggtcttgcgtcactacctgggcctgggtcaggtcagccctgaagcgctg
tatcgaacattgctgacgatcctgggtgagctcgcgacgtttgccagcgacagcaagcgc
gcgcacttcgaggggcattaccggcacagtgatcagagcgccagctttcgcggattgatg
gagccgattcgcagcctgctgtccatggtgcttgaacagcatgccattgagctggcgctg
cagcctcgtcagtacgggatattggtgtgcccggtaagcgatctcaacctgttgggttca
gcgaccttcattctggccgccagtgcccattgtgacgccgaggagctgcgccaccggctt
ccggcgcacctcaaggttggccccgtagagcggattcgcgagttggtcaacctgcatttg
gcgggcatcaaagtcaagccgctgccggtggctccccggcagataccgtttcatgccaca
aaaacctatttcatgctcgaactcggtgcccgggacatcgagcagttgaaacagtcggga
ggttttgccttccacgtcagcggcgaatttgccgaactggaattgaaattctgggccatc
aggaactga
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