Pseudomonas yamanorum: AK972_2391
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Entry
AK972_2391 CDS
T05821
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_2391
Transcription factors [BR:
pym03000
]
Prokaryotic type
Helix-turn-helix
Other families
AK972_2391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_7
HTH_30
AAA_5
nSTAND6
AAA_2
HTH_23
AAA
Mg_chelatase
AAA_3
HTH_28
AAA_7
AAA_16
HTH_22
HTH_20
HTH_38
HTH_11
DUF2089
dnstrm_HI1420
HTH_10
nSTAND3
HTH_Tnp_1
HTH_psq
MCM
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AMW83191
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Position
complement(2668217..2670037)
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AA seq
606 aa
AA seq
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MSTPLAHDAIIQDSWRRCRAYGLDHQSTPSFDQLPADGVSQLLESQHSLVQTTHQEVLPY
YENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLARGFSAGASWMERSSGTNAIGTALA
CAQAVHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSSDSYLPPSHTLGMVKMMSQ
TVENRLILNLFRGEHFQLTFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR
VLIDSLFKVSLLELLNQPEGLPFSLQAAGRNRFQCLLKRPKQAPVQARVFVETKKPRESG
PTAISLKTLHFGDARVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRSQQA
FIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQA
RLLRVLQERCVQPVGSSELYPVDLRIISATNRSLREQVQLGRFREDLYYRIGGLTLELPP
LRERTDKQALFKQLWQQHREPTQWAGLSNEVLALFEQHPWPGNLRQVSSVLQVALAMAEE
LPIRVEHLPDDFFVDLNGLVPEPAGEKLDDSMDLAQRLKAAGGNISHLARELGVSRNTLY
KRLRQN
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaccgctggcgcacgatgccatcatccaggactcctggcgccgctgccgggcc
tatggcctggatcaccagagcacgccgagcttcgaccaactgcccgcagacggcgtcagc
caattgctcgaaagccagcattccctcgtgcagaccacccaccaggaagtgctgccctac
tacgaaaacattctcagcaattccaactgcctgatcatgcttgccgacaaccagggccag
gtgctgacttcgtggggcacccaacgttttatcgaacccaagctggcccgtggtttcagc
gccggcgccagctggatggagcgctccagcggcaccaacgccatcggcaccgccctggcc
tgtgcccaggcagtgcatatcgaacacgacgaacacttcctcaaggccaaccgtttcatg
accggctcggcagcgccgatcttcgatgcgcagcgggaaatcatcgcggtgctggatgtg
tccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatgatgagccag
accgtcgagaaccggctgatcctcaacctgtttcgcggtgagcatttccagctgacgttc
aataccgggttgaacaatctcgacagccaatgggccgggctgctgatttttgatgaaagc
ggccaggtactgtcggccaatcgccgggctgacaacctgctgggcatcagcctgtcgcgg
gtgttgatcgacagcctgttcaaggtgtcgctgctggaactgctcaaccagcccgaaggc
ctgcccttctcgctgcaagccgccgggcgcaaccgtttccaatgcctgctgaaacggccg
aaacaggcgccagtgcaggctcgcgtgtttgttgaaacgaaaaagccccgcgaatccggc
cccacggccatcagtctcaagaccctgcacttcggcgatgcccgcgtggaaaaggccgtg
cgtcaggccgagcgcctgctggaaaaggacattccgttgctgatccatggcgaaaccggc
gtcggcaaggaagtgttcgtcaaagccctgcaccaggccagttcccgcagccaacaagca
tttatcgccgtcaactgcgcagcgatccccgccgaactggtggagtcggaactgttcggc
tacgaaaaaggcgcgttcaccggcgccaaccagaaaggcagcatcgggctgatccgcaag
gcagataaaggcacgctgttcctcgacgagatcggcgacatgcccctgccgacccaggcc
cggctgttgcgggtattgcaggaacgctgtgttcagcctgtaggcagcagcgagttgtac
ccggtggatttgcggatcatctccgccaccaaccgctcgctgcgcgaacaggtccagctc
gggcgttttcgcgaagacctgtattaccgaatcggtggcctgaccctggagctgccgccg
ctacgggagcgcacggataaacaggcgttgttcaagcagctgtggcaacagcatcgcgag
ccgacgcagtgggccgggttgagtaacgaggtactggccttgtttgaacagcatccgtgg
ccgggcaatctacgccaggtgagcagcgtgttgcaggtggcgctggccatggcggaagag
ctgccgattcgggtggaacatttgccggatgatttttttgtggatttgaatgggctggtg
ccagagccagccggtgagaagctggacgacagcatggaccttgcccagcggttgaaggcg
gcgggcggtaatatttctcacctggccagggagctcggcgtcagccgcaataccctgtac
aagcgactgcggcaaaactag
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