Pseudomonas yamanorum: AK972_2576
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Entry
AK972_2576 CDS
T05821
Name
(GenBank) putative DNA-binding protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_2576
Transcription factors [BR:
pym03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AK972_2576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_6
HTH_Tnp_ISL3
HTH_7
HTH_IclR
HTH_31
HTH_11
HTH_26
HTH_3
HTH_10
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
AMW83376
LinkDB
All DBs
Position
2879357..2880382
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AA seq
341 aa
AA seq
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MLERAKHFSIKQLATQAGVSKATVDRVLHERGSVHAQTRRRIEQALDELESQEKNGLAVG
RTFHVDVIMHTPKRFSAAVQAAITAQLGSLAPFRIAPRFHLFEEIEPQAMHDQLLRCLET
GSQGVVLKAADEPAVNLAVRHLAAAGIPVVTLVTDLPHSERIGYVGMDNRTAGQTAAYLL
SRWLSPQPQEVAVVIGSELFRGEEEREMGFRMWLRGRATHLRVLDISGGYGVYDRTFARV
TDVLKQHPELKAVYSVGGGNRAIVDAFAALDRPLDVFIAHDLDEENRQLLAEEKVAAIID
HNLQIDARHVFLHILQFHRLWKAGPIAPSQVQIVTPFNLPD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacgcgctaaacacttttccatcaagcaactggccacccaggcgggcgtcagc
aaggcgacggtcgatcgcgtcttgcatgagcgcggcagcgtgcacgcccaaacccggcgg
cgtatcgaacaggctctggatgagctggaatcccaggaaaaaaatggcttggcagtaggc
cggacctttcatgtcgatgtgatcatgcacacgcccaagcgcttcagtgcggcggtgcag
gccgccatcaccgcccaactgggcagcctggcaccgtttcgtatcgccccgcggtttcat
ttgttcgaagaaatcgagcctcaggcgatgcacgaccaattgctgcgctgcctcgagacc
ggcagccagggtgtggtgctcaaggccgcggacgagccggcggtgaatctggcggtcagg
cacctggcggccgcaggtattccggtggtgaccctggtcaccgatctgccccacagcgag
cgcatcggctacgtaggcatggataaccgcaccgccggacaaaccgccgcgtaccttctg
tcccgctggctgtcaccccaaccccaggaagtggcggtggtgattggcagtgaattgttc
cggggcgaggaagaacgcgaaatgggttttcgcatgtggctgcgcggccgtgcgacgcac
ctgcgggtactggatatcagcggtgggtacggcgtgtatgaccgaacgtttgcccgggtc
accgatgtgttgaagcagcatcccgaactgaaggcggtgtacagcgtcggcggtggcaac
cgcgcaattgtcgacgccttcgcggctctggatcgcccgttggacgtgtttattgctcac
gacctcgacgaagagaatcgccagctgttggctgaagaaaaagtcgccgcgattatcgat
cacaacctgcagatcgatgcgcgccatgtgttcctgcacatcctgcaatttcatcggctg
tggaaggctgggccgattgcgccgtcacaggtacagatcgtcacaccgttcaacctgccg
gactga
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