Pseudomonas yamanorum: AK972_3019
Help
Entry
AK972_3019 CDS
T05821
Name
(GenBank) Rtn protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AK972_3019
Enzymes [BR:
pym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AK972_3019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
AMW83819
LinkDB
All DBs
Position
3389004..3390548
Genome browser
AA seq
514 aa
AA seq
DB search
MPLTVKGPRKASTRLLITLLSGALPILLGVLILYWQAGRTLEHSTAQTAREAVRQFDLML
DNTALAAKDLLPLAGHECDNPTQLALREQVTRRPFVRATTLSWQRNIYCSSLFGGNHQSP
VNPEDYVDGRLWLMKGNPVTPDTALLVYRLTEGDRGAFASIDGYHLTNALRLISRYTDLV
LQVGPNWLASDGKVHSTALPTFSVAHHHLDSTRYTYSVEAGMPEGETWRYMQARYPALFI
LVVFFGVLAGILAHWLQKRSSAPTLELQRALGANEFVPYYQPVVRGQDIRQWAGCEVLMR
WNHPKEGLVRPDLFIPLAEHSGLIVPMTRALMRQTALQLAPHAEQFADGFHVGINITARH
CHDLELVEDCREFLAAFPPGKVILVLELTERELIEPTDVTRQLFQALHEMGVMIAIDDFG
TGHSSLGYLRNFNVDYLKIDQSFVAMIGVDALSRHILDSIIELSAKLDLGIVAEGVETPE
QCEYLAAQGVDFLQGYLFGKPVPCDEFIRFLNSH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgccactgaccgtcaaaggcccacgaaaagccagcacccgcctcctgatcactctgctc
agcggcgcactgccgattttgctgggggtgctgatcctgtactggcaagcggggcgcacc
ctggagcacagcaccgcgcaaaccgcccgggaagccgtgcgccagttcgacctgatgctc
gacaataccgcactcgccgccaaggacttgctgccgctggccggccatgaatgtgataac
ccgacacaactggcgctacgggaacaagtcacccgtcggccttttgtgcgcgccacgacc
ttgtcctggcagagaaacatctattgcagctcgttgtttggtggcaaccaccagtcgccg
gtcaaccctgaagactacgtcgatggccgcctttggctgatgaaaggcaacccggtgaca
cctgacaccgcattgctggtgtatcgcctcaccgagggcgaccgtggggcctttgcctcc
attgatggctaccacttgaccaacgccttgcgcctgatcagtcgatataccgacctggtg
ttgcaggtggggcctaactggctggcgtcggatggcaaggtgcacagcacagcgctgccg
acattttccgtcgcgcaccatcatctcgactccacgcggtatacctacagcgtggaagcc
gggatgccggagggcgaaacctggcgctacatgcaggcgcggtatcctgcgctgttcatc
ctggtggtgtttttcggcgtgttggcgggcatcctcgcccactggctgcaaaagcgctca
tcggcaccgaccctcgagctgcaacgtgccttgggcgccaatgaattcgtgccctattac
cagccggtggtacgtggccaagacattcgccagtgggccggttgtgaagtgttgatgcgc
tggaatcaccccaaggaaggcctggtgcgccccgacctgttcattcccctggccgagcat
tccggcctgatcgtgccaatgacccgcgccttgatgcgtcagaccgccttgcaactggcg
ccccacgccgagcagttcgcggatggctttcatgtcgggatcaacatcaccgcccgccat
tgtcacgacctggaactggtggaggactgccgggaattcctcgccgccttcccgccgggc
aaggtgattctggtgctggaattgaccgagcgcgagttgatcgaacccacggatgtcacc
cgccaactgttccaggcgctgcacgaaatgggggtaatgattgcgatcgacgacttcggt
accggtcactcgagcctgggttatttacgcaacttcaatgtcgattacttgaagatagat
caaagctttgtggcgatgatcggggttgatgcactgtcgcggcatatactcgacagcatc
attgaactgtctgccaagctcgacttgggcatcgttgccgaaggtgtcgaaacaccagaa
caatgcgaatatcttgccgctcaaggtgttgatttcttgcagggctacctgtttggcaag
cctgtaccttgcgatgagttcattagatttctgaacagccattga
DBGET
integrated database retrieval system
