Pseudomonas yamanorum: AK972_3145
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Entry
AK972_3145 CDS
T05821
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00270
Cysteine and methionine metabolism
pym01100
Metabolic pathways
Module
pym_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AK972_3145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_3145
03032 DNA replication proteins [BR:
pym03032
]
AK972_3145
03036 Chromosome and associated proteins [BR:
pym03036
]
AK972_3145
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pym02048
]
AK972_3145
Enzymes [BR:
pym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
AK972_3145
Transcription factors [BR:
pym03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
AK972_3145
DNA replication proteins [BR:
pym03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
AK972_3145
Chromosome and associated proteins [BR:
pym03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
AK972_3145
Prokaryotic defense system [BR:
pym02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
AK972_3145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AMW83945
LinkDB
All DBs
Position
3500284..3502365
Genome browser
AA seq
693 aa
AA seq
DB search
MSAQQKKHPFDFKTQYGLGFNPQDDEIVVDFFCGGGGAGTGLEIGLGRAVNVAKNHSPQA
ISMHTMNHPGAQHFTTDVFEGDPDTECGGKAVGWFHMSPDCTHHSQAAGGQPRKREIRNL
SWIGLKWAGMKRPRVISLENVKQILQWGRLIAKRDKATGRVVTLDQIPHPTKKGATTNRV
AAPGEQVPVSNQFLVPDPKQRGRTWRRFVALLEGMGYVVEWKVIKACDFGAPTSRERLFM
IARCDGEPIVWPEPTHAKNPVKGQQKWKTAADCIDFTDLGKSIFGRKKDLAPATLRRVAK
GMKKFVIDSAAPFIVPIANWSGETVQSADEPLRTITSYPKGGAFSVVSPIIAPATHQGSD
RINDPLDPLPTVTCANRGELTLISPLMVGAGGPEYSGKPVSVDQPTGTVTTQNHRAIAAA
HLVKFRFDDAGKALDEPLPTITSGGNYQRPAGAAHAMGISTVFMAQMNGGFNTTDAKSIE
DPMTTVTNTGSQQQLVAANLVHLRGNCDARDVNDPLHTVSAGGQHHGLVSAFMERAFGGS
IGQGLEEPAPTITAGGGGKSSLVSLTLSPEHEAGALRVAAFLISYYGTENISACDSPAPT
ITTKDRLAMVTVMVKGTPYVIVDICLRMLKPSELYKAQGFPADYIISHGADGKPFTKTQQ
VHMCGNSVSPPPMAVLARANDPWQKLAVVIKAA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacaacagaagaaacaccccttcgatttcaaaacccaatacggactcggcttc
aaccctcaggacgatgagatcgttgtcgacttcttctgcggtggtggtggtgccggtacc
ggcctggagatcggcctgggccgcgcggtgaacgtcgccaagaaccacagtccgcaagcg
atcagcatgcacaccatgaaccacccaggcgcccagcacttcaccaccgacgtgttcgag
ggtgaccctgacaccgagtgtggcggcaaggccgtcggctggttccacatgtcaccggac
tgcacgcaccacagccaggcggccggcgggcaaccgcgcaagcgtgagatccgcaacctg
tcgtggatcggcctcaagtgggcaggcatgaagcggcccagggtgatcagcctagagaac
gtgaaacagatcctgcagtggggccggttgatcgccaagcgcgacaaggccaccggccgc
gtggtgacccttgaccagattccgcacccaaccaaaaagggcgcgactaccaaccgagtg
gcggcgccaggcgaacaggttccggtttccaaccagttcttggtgcctgacccgaagcag
cgcggccgcacctggcgccgcttcgtggcgctgctggagggcatgggttacgtcgttgaa
tggaaagtcatcaaggcttgcgacttcggcgcgccgaccagccgggaacgcctgttcatg
atcgccaggtgcgacggcgagccgattgtgtggccggagccaacccacgccaagaacccc
gttaagggtcagcaaaagtggaaaaccgccgctgactgcatcgacttcaccgacctgggc
aagagcattttcggccgcaagaaagacctggccccggccaccctgcgccgtgttgccaag
ggcatgaagaagttcgtcatcgatagcgcggcgccgttcattgtgccgattgccaactgg
tcaggcgagactgtgcaatcggcagacgagccgctgcgcaccatcacctcctacccaaag
ggcggcgccttctcggtggtgagcccaatcatcgcaccggcaacgcatcagggcagcgat
cgtatcaatgacccgcttgatcctctgcccacggtaacgtgcgcgaatcgcggcgagctg
acgctgatcagcccgttgatggttggggcgggcggcccagagtattccggtaagccggtg
agcgtcgaccagccgacaggtacagtcacgacacagaaccaccgcgcgatcgcagcggcg
catctggtgaagtttcgctttgatgacgcgggaaaggcgctggacgagccactgccgacc
atcaccagcggcggcaactatcagcgcccggccggggctgcccacgctatgggcatctcc
acggtgttcatggcccagatgaatggtggcttcaacaccaccgacgccaagagcatcgag
gacccgatgaccacggtgaccaacaccggcagccagcaacagctggtggcggcgaacctg
gtgcacttgcgcggcaactgcgatgcccgggacgtcaatgacccgctgcacaccgtcagc
gccggtggccagcaccacgggttggtcagcgcattcatggagcgagcattcggcggcagc
attggtcagggcctggaagaaccggcgccgaccattactgccggtggcggcggcaagagc
tcgctggtttcgctcacgttatcgcctgagcacgaagccggtgccctccgcgtagccgct
ttcctgatcagctactacggtaccgagaacatcagcgcttgcgattcgccggcgccgacg
atcaccaccaaggaccgcctggcaatggtcaccgtgatggtcaagggaaccccctacgta
atcgtcgacatctgcctgcggatgctgaagccgtccgagctgtacaaggctcagggcttc
cccgctgattacatcatcagccacggcgccgacggcaagccgttcaccaagacacaacag
gtgcacatgtgcggcaacagcgtaagcccaccgccgatggctgtcttagctcgggccaac
gatccatggcaaaagctggctgtagttatcaaagccgcttag
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