Pseudomonas yamanorum: AK972_3222
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Entry
AK972_3222 CDS
T05821
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym03030
DNA replication
pym03430
Mismatch repair
pym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK972_3222
03430 Mismatch repair
AK972_3222
03440 Homologous recombination
AK972_3222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pym03032
]
AK972_3222
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_3222
Enzymes [BR:
pym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK972_3222
DNA replication proteins [BR:
pym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK972_3222
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK972_3222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMW84022
LinkDB
All DBs
Position
complement(3601717..3602463)
Genome browser
AA seq
248 aa
AA seq
DB search
MAIRSVVLDTETTGMPVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDRESDEGAIGVHG
ITNEFLVGKPRFAEVADEFFEFINGAQLIIHNAAFDVGFINNEFALMGATDRADITRHCS
ILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLS
LAGNASDGNGSAEGSGNRPSEIRRLPADRQPTTIIRASEQDMAEHAARLEAIAKSAGAPA
LWTQLTQQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccatccgatctgttgtactcgataccgaaaccaccggcatgccggtgaccgacggc
caccggatcattgaaatcggctgtgtcgaactgatgggccgtcgcctcaccggccggcat
ttccacgtctacctgcaaccggatcgggaaagtgatgagggcgccattggcgtccacggc
atcactaacgaattcctagtgggcaagccacggtttgccgaagtggccgatgagttcttc
gagttcatcaacggcgcgcagctgatcatccataacgcggcgttcgacgttggcttcatc
aacaacgaattcgcgttgatgggcgcgaccgaccgggctgatatcacccggcactgctcg
atcctcgacaccttgatgatggcccgtgagcgtcacccgggccagcgcaacagcctcgat
gccttgtgcaagcgctatggggtcgacaactccggccgtgaactccacggcgccttgctc
gactccgagattctcgccgacgtctacctgaccatgaccggcggccagaccagcctgtcc
ctggccggtaacgcttcggacggcaatggttcggcagaaggctcgggcaaccgtccttcg
gaaatccgccgcctgccagcggatcgtcagcccaccacgattattcgcgccagcgagcaa
gacatggccgaacacgcggcgcgtcttgaggcgatcgccaagtccgccggcgcacccgcg
ttgtggacccaattgacccagcaataa
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