Pseudomonas yamanorum: AK972_3233
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Entry
AK972_3233 CDS
T05821
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K13896
microcin C transport system ATP-binding protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AK972_3233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_3233
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
AK972_3233
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_29
AAA_16
ATP-synt_ab
AAA_22
nSTAND3
NB-ARC
NACHT
DUF87
SbcC_Walker_B
AIG1
Mg_chelatase
ATPase
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_7
NTPase_1
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AMW84033
UniProt:
A0A143GI91
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Position
3613549..3615153
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AA seq
534 aa
AA seq
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MNQDNLIEVRDLSVEFVVGNTHQRVVNNVSFDIKRGETLALVGESGSGKSVTAHSILRLL
PYPLARHPSGTIQYANHDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL
GLHKGLTGKVATKRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI
ADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQA
ECETLFQSPQHPYTQELLAAEPSGGPATNEIGPPLLEVDDLKVWFPIKKGFLRNTVDYVK
AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIASKGGIRFEGHQMDKLSQQQVRPL
RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTAAEQEAAIIAALKEVGLDPETRNR
YPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRNLQAKYNLTYLF
ISHDLAVVKALSHQLMVVKHGQAVEQGDAPAIFANPQHAYTRQLLEAAFLVPGP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggacaatctgatcgaagtccgcgacctctccgtcgagttcgtcgtaggcaac
acccaccagcgtgtggtgaacaacgtcagcttcgatatcaagcgcggcgaaaccctggcg
ctggtgggcgaaagcggctcgggcaagtcggtcacggcgcactcgatcctgcgcctgttg
ccctatccactggcgcgccacccttcggggacgatccagtacgccaaccacgatttgctg
accctgaaagaaaagaccatccggcatattcgcggcaaccggattgcgatgattttccag
gagccgatgacttcgctgaacccgctgcactccatcgagaagcagatcaacgaagtgctc
ggcctgcacaaggggttgaccgggaaggtcgctaccaaacgcaccctggagttgctggaa
ctggtaggcatccccgagccccacaagcgcctcaaagccctgccccacgagctgtccggc
ggccagcgccagcgggtgatgatcgccatggccctggccaatgagccggagctgctgatt
gccgacgaaccgaccacggcactcgacgtcaccgtgcagttgaagatcctggagctgctc
aaggaattgcaggcgcgcctgggcatggccttgctcttgatcagccatgacctgaacctg
gtcaggcgcattgcccaccgggtatgtgtgatgcaaaaaggctgcatcgtcgaacaggcc
gaatgcgaaaccctgttccagtcgccgcagcacccttacacccaggagctgctggcagcc
gagcccagcggcggccctgccaccaatgaaattggccctccgctgctcgaagtcgacgac
ctgaaagtctggttcccgatcaaaaaaggcttcctgcgcaacaccgtcgattacgtcaag
gcggtggatggcatcaacttcagcctgccccagggccagacccttggcatcgtcggtgaa
agtggttcgggcaagtccactttaggcctggcgattttgcggctgattgcgagcaagggt
ggcattcgcttcgaaggtcatcagatggacaaactcagccagcagcaggtgcgcccgctg
cgccgggaaatgcaggtggtgttccaggacccgtttggcagcctgagcccgcgcatgtgc
gtgagcgaaatcgtcggcgaaggcctgcgcatccacaagatggggactgccgccgagcag
gaagcggcgattatcgccgcgctcaaggaagtaggcctggacccggaaacccgcaatcgc
tacccccacgagttttccggcggccaacgccagcgcatcgctattgcccgcgcgttggtg
ctcaagccacgtctgattttgctggatgaaccgacctcagccctggaccgcaccgtgcag
cgccaggtagtggaactgctgcgcaacctgcaggccaagtacaacctgacctacctgttc
atcagccacgacctcgccgtggtcaaggccttgagtcaccagttgatggtggtcaagcac
gggcaggcggtggagcaaggggatgcacctgcgatcttcgccaacccccagcatgcctac
acccggcaactgctcgaggcagcgttcctggtgcccggcccctag
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