Pseudomonas yamanorum: AK972_3620
Help
Entry
AK972_3620 CDS
T05821
Name
(GenBank) Outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pym
Pseudomonas yamanorum
Pathway
pym01501
beta-Lactam resistance
pym02020
Two-component system
Module
pym_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AK972_3620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AK972_3620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_3620
01504 Antimicrobial resistance genes [BR:
pym01504
]
AK972_3620
Transporters [BR:
pym02000
]
Other transporters
Pores ion channels [TC:
1
]
AK972_3620
Antimicrobial resistance genes [BR:
pym01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
AK972_3620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AMW84420
UniProt:
A0A143GK12
LinkDB
All DBs
Position
4007346..4008674
Genome browser
AA seq
442 aa
AA seq
DB search
MKKRQPLLQLNTLAVALAFALPAMSYASDQSDSKGFVADSSLNILNRNLFWNQNGNGAHT
RDWSQALMATYSSGFTQGTVGIGIDAFADLALRIDGDTDRAGGPNIPSDANGNPDHGFAK
AGGDVKFRISNTTLKVGDLQPTSPVFATADNYLMPQTATGFQIDSHEISGLNLEAGHYTS
GTGTTTTSRSGDILASYAGVAASSASFAGGKYQFSKEFTASLYGAHLEDVWNQYYVNLNL
VHPLTDDQSVALDFNLYRTLDDGSAKAGTIDTTAASLAAAYTLGAQTFTLAGQKVHGDEP
FDYVGFGETNAGVGAGRYGNSINLADSVQYSDFNGPGERSWQMRYDLDMSTFGAPGLSFM
ARHIRGAGIDGTHTPGNSAYTGFYGANDQEHETDAEVKYVVQSGPAKKLSFRLREAWHDG
DASTGGHLVQTRLITEYPLNIF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgtcaaccgttacttcagcttaataccttggccgtggcgctggcatttgcc
ttgccggccatgagctatgccagcgatcagtccgactccaagggctttgtcgccgacagc
agcttgaatatcctcaaccgcaacctgttctggaaccagaacggcaacggtgcccacacc
cgtgactggagccaggcgctgatggcgacctacagctcgggcttcactcaaggcaccgtt
ggcatcggcattgatgcgtttgccgacttggcgttgcgcatcgacggggacaccgatcgt
gccggtggcccgaacattccgtccgacgccaatggcaatccggatcacggcttcgcgaag
gctggtggtgacgtcaagttccgcatttccaataccacgctcaaggtcggcgacttgcag
cctacatcgccggtgttcgccaccgccgataactacctgatgccccagaccgcaacaggc
ttccagatcgacagtcatgaaatctccggcctgaacctggaggccggccattacacctcc
ggcaccgggaccaccaccacctcgcgcagcggcgacattctcgccagctatgcaggcgtg
gctgcgtcgtcggccagcttcgcggggggcaaataccagttcagcaaggaattcaccgcg
tcgctgtacggggcgcacctggaagacgtgtggaatcagtactacgtcaacttgaacctt
gttcatccactgaccgatgaccaatccgtcgcgctggacttcaacctctatcgcacactg
gacgacggcagcgccaaggccgggaccatcgacaccaccgcagcctcgctggcggctgcc
tacaccctgggcgcgcagacgttcaccctggccggacagaaagttcatggtgacgagccg
ttcgactatgtcggctttggggagaccaatgccggtgtcggtgccggccgctacggcaac
tcgatcaacctggctgactcggtgcaatactccgacttcaacggaccgggcgagcggtcc
tggcagatgcgctatgacctggacatgagcacctttggcgcccccggcctgagcttcatg
gcccgccatattcgcggtgctggcatcgacggtacgcatacccccggcaattcagcctac
accgggttctatggtgccaacgaccaggaacacgagaccgacgccgaagtgaaatacgtg
gtgcagagtgggccggccaagaagctgtccttccgcctgcgggaagcttggcacgatggt
gatgcgtccaccggggggcatctggtgcagacacgcctgattaccgagtatccgttgaat
atcttctaa
DBGET
integrated database retrieval system
