Pseudomonas yamanorum: AK972_3779
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Entry
AK972_3779 CDS
T05821
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_3779
Enzymes [BR:
pym01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AK972_3779
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AK972_3779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AMW84579
LinkDB
All DBs
Position
4181033..4182574
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AA seq
513 aa
AA seq
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MTKAVRNLCLVLGDQLSFDLASLEGLDSQHDAVLMVEVMEEASHVPHHPQKIALVFSAMR
HFAQALQQRGIRVQYVALDDPQNTGSVPGELGRWQSLMQPKELHLTECGDWRLEQSLKDC
GLPIQWHADSRFLCSRDEFAAWASGKKQLRMEFFYREMRRKSGLLLNGDGTPVGGAWNFD
ADNRKALPKGTKAPYPARFASDSITQEVLVLVRKHFSSHYGDLDTFDYPVTHTDAQALWD
YFLDYGLAGFGDYQDAMASDEPFLFHARISAALNIGLLDLRQLCSDVEAAYWSGGIGLNA
AEGFIRQLIGWREYVRGVYWLKMPDYAAGNAFGNNRPLPEFYWTGETQMNCMRQAIGQSL
KHAYAHHIQRLMVTGNFALLAGIVPSQICEWYLAIYMDAFEWVELPNTLGMVMHADGGYL
GSKPYCASGQYIKRMSDYCRDCAYKVTESTADNACPFNALYWHFLMRHGDLLRGNQRMAM
LYKNLDRMPESKQDALWNRGQRLLAKLDAGESL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaggccgtcagaaacctgtgcctggtgctgggcgatcagttgtcctttgacctg
gcctccttggaggggctggacagccagcacgatgccgtcttgatggtcgaggtcatggag
gaagccagccatgtcccccaccatccgcaaaaaattgccctggtcttcagcgccatgcgc
cactttgcccaggcgttgcagcagcgtggtatccgggtgcagtacgtcgccctggacgac
ccgcaaaacaccggctcggtacccggcgagctagggcgctggcaatcgctgatgcagcca
aaggaactgcacctgaccgaatgcggcgactggcgcctggaacaatccctgaaagactgc
ggcttgccgatccagtggcacgccgacagccgctttttgtgcagccgtgacgaattcgcc
gcttgggccagcggcaaaaaacagctgcgcatggagttcttctaccgggagatgcgccgt
aagagcgggctattgctcaacggtgacggcaccccggtcggcggcgcctggaactttgat
gcggacaaccgcaaggcgctgcccaagggaaccaaagcgccctacccggcgcgctttgcc
tcggactccatcacccaggaagtgctggtgctggtacgtaaacacttcagcagccactac
ggcgacctggacaccttcgattacccggtaacccacaccgatgcccaggcactgtgggac
tactttctggattacggcctggccgggttcggcgactaccaggacgccatggccagcgac
gagcccttcctgtttcatgcccgcatcagcgcggcgctgaacatcggcctgctggacctg
cgccaactgtgcagcgacgtggaggcagcctattggtcgggcggcatcgggctgaatgcc
gccgaagggtttatccgccaactgattggctggcgtgaatacgtacgcggcgtgtactgg
ctgaagatgcctgactatgccgctggcaatgcattcggcaacaaccgcccgctgccggag
ttctactggacgggcgagacgcaaatgaactgcatgcgccaggcgatcggccagagcctg
aaacatgcctatgcccatcacatccagcggctgatggtcaccggcaatttcgccctgctg
gccggcatcgtgcccagccagatatgcgagtggtacctggcgatctacatggacgctttc
gaatgggtcgagctgcccaacaccctgggcatggtcatgcatgcggatggcggctacctg
ggttcaaaaccttattgcgcgagcggacaatatataaagcgcatgtcggactactgccgc
gactgtgcgtacaaagtcactgaaagtaccgctgacaatgcctgccctttcaatgcgctt
tactggcacttcctgatgcgccacggcgacctgctgcggggcaatcagcgcatggccatg
ctctacaagaatctcgaccggatgcctgaatcaaagcaggacgcgctgtggaaccggggc
cagcggctgctggcgaagctggatgcgggcgagtcactttga
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