Pseudomonas yamanorum: AK972_3796
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Entry
AK972_3796 CDS
T05821
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_3796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_3796
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AK972_3796
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
nSTAND1
AAA_25
nSTAND3
RsgA_GTPase
AAA_29
NACHT
AAA_16
AAA_18
MobB
TsaE
PRK
CbiA
NB-ARC
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
AMW84596
LinkDB
All DBs
Position
complement(4204017..4205675)
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AA seq
552 aa
AA seq
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MTMNIHTLGPLVDIRDLTVRFGQAEPVLHGVSLQLHRGECLALVGESGSGKSVTARTLAG
LTGKDAHVQAAKLAFQGVDLRQLNERAWQQLRGASIGFVMQDALGALDPLRRVGAEIEEP
LHLHTALGLEARRLRVLELLRDVGVPEPELRASQYPWQLSGGLRQRALIASAIACNPRLI
IADEPTTALDATVQAQVIALLESLRGEDNALLMVSHDLSVVSRLADRVAVMRHGVIVEEG
STEQVLQDPRHPYTQLLLRAAKAVHFQPTRRLLTAVEPEPAPEGEVLLEARDLSKTFVGP
DGKTRTVLNQVSLQLRRGETLGVVGESGCGKTTLTRLILGLETADAGEVWIKGQRWSDLD
TRQKREARRAVQVVFQDPLSSFDPRYTVQRVLFEALVVAGVPRHARRDRALELLELVRLD
ASALSRRPIELSGGQRQRIAIARALASEPQILICDEPVSALDVSVQAQILELLDDLKRRL
GLACLFISHDLGVINHVSERVLVMKAGEVVESGSVRAVFDRPAHAYTRALIDAIPTLETN
YTPVPFYLNVAI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaacatccacaccctcggcccgctggtcgacatccgcgacctgacggtccgt
tttggccaggccgagccggtgttacacggagtcagtctgcagttgcatcgtggtgaatgc
ctggcgctggtgggggagtcgggctccggcaaaagcgtcaccgcccgcaccctggccggc
ctcacgggcaaggacgcccacgtccaggccgccaagctggccttccagggcgtcgacctg
cgccagctcaatgagcgggcctggcagcaactgcgcggcgcgagcatcggctttgtgatg
caggacgccctcggcgcgctggacccgctgcgccgcgtcggtgccgagatcgaagaaccg
ttgcacctgcacaccgcattgggcctggaagcgcgccgcctgcgggtgctggaactgctg
cgggatgtgggcgtgccggaaccggaactgcgcgccagccaatacccctggcaactttcc
ggtggcttgcgccagcgtgcgttgatcgcctcggccatcgcctgcaacccacggctgatc
attgccgatgaacccaccacggcactggacgccacggtgcaggcccaagttatcgcgctg
ctggaaagcctgcggggcgaagataatgcactgctgatggtcagccacgacctgtcggtg
gtctcacgcttggccgatcgcgtggccgtgatgcgccacggcgtgatcgtggaggagggc
agcaccgagcaggtcctgcaagacccgcgtcatccgtatacgcaactgctgctgcgggcg
gccaaggccgtgcacttccagcccacacgccggttgcttacggcagttgaaccggagcct
gctcccgaaggcgaggtgctgctcgaagcgcgtgatctgtccaaaacctttgttggtccc
gacggcaaaacccgcacggtgttgaaccaggtgtcgttgcagctgcgtcgcggcgaaacc
ctaggggtagtgggcgaatcgggctgcggcaagaccaccttgacccgcctgatactcggc
ctggaaaccgccgatgccggcgaggtatggatcaagggccagcgctggtccgacctcgac
acccggcaaaaacgcgaagcccggcgtgcggtgcaagtggtgttccaggaccccctcagc
tccttcgacccgcgctacaccgtgcagcgtgtgctgttcgaagcgctggtggtggccggc
gttccgcgtcacgcacggcgcgaccgcgcgctggaactgctggaactggtgcgcctcgat
gccagcgccttgtcccgccgacccatcgaactctccggcggccaacgccaacggattgcg
attgcccgagcgttggcttccgagccccaaatccttatctgcgatgaaccggtctcggcg
ctggacgtgtcggtacaggcacagatcctggagctgctcgacgacctcaagcgccgcctc
ggcctggcctgcctgttcatctcccacgacctgggggtgatcaatcacgtcagtgaacgc
gtactggtgatgaaggccggcgaagtggtggagtccggctcggtacgcgccgtgttcgac
cgcccggcccatgcctatacccgcgcgctgatcgacgcgatcccgacccttgaaaccaac
tacacgccagtcccgttctacctgaacgtcgcgatctga
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