KEGG   Pseudomonas yamanorum: AK972_3856
Entry
AK972_3856        CDS       T05821                                 
Name
(GenBank) D-amino acid dehydrogenase family protein in hydroxy-L-proline catabolic cluster
  KO
K21060  D-hydroxyproline dehydrogenase [EC:1.5.99.-]
Organism
pym  Pseudomonas yamanorum
Pathway
pym00470  D-Amino acid metabolism
pym01100  Metabolic pathways
Module
pym_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:pym00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AK972_3856
SSDB
Motif
Pfam: DAO HI0933_like FAD_binding_2 NAD_binding_8 Pyr_redox_2 Pyr_redox_3 FAD_oxidored Pyr_redox 3HCDH_N UDPG_MGDP_dh_N Thi4 ApbA FAD_binding_3 NAD_binding_9 GIDA F420_oxidored MurD-like_N NAD_binding_2 TrkA_N SecM NAD_Gly3P_dh_N Lycopene_cycl
Other DBs
NCBI-ProteinID: AMW84656
LinkDB
Position
4260532..4261785
AA seq 417 aa
MSDNVIPDIAVVGAGIIGVACALQLARQGRRVVVIDQQQPGHGASFGNAGHLATEQVFPI
ADASILTRLPAMLMDPMGPLRLDWKYLPRALPWFTRLLLNLRPAAFQRTVAGIRALNESS
LGAWHRLLESINRPGLMREDGSLLIFERPDSRQAIDALQARMRQQAVPVDYWQASAVQKV
APQLSEGIQGGLFFPRTGHFLDPYRVVCELVEAAKACGVQFLKHSVLGGKLDEHGVSLRT
DQGAVAARQVLIACGAHSAKLTAELTGKKVPLDTERGYHLMLPNEHGRLPFAVTSLERKF
IMTPMDGGLRLAGTVEFAGLDRPPNMERAWQLHRLSQGLFRRDLSAEDATPWMGFRPSLP
DSLPIIDKVCDGKVLLAFGHQHLGLTQAAVTAELIAQLATSAPNGLLALEPYRLDRF
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgagcgataacgtcattccagacatcgccgtggtcggggccggcatcatcggtgtcgcc
tgcgcgctgcaactggcacgccaggggcggcgagtggtggtcatcgaccaacagcaaccc
ggccacggtgcctcgttcggcaacgccgggcacctggcaaccgagcaagtgtttcccatc
gcggatgcgtcgatccttacacgcttgccagccatgctcatggacccgatgggcccgctg
cgcctggactggaaatacctgccacgtgcgctgccgtggtttacccgactgctgttgaac
ctgcgcccggcggccttccagcgcaccgtcgccgggatccgtgccctcaacgaaagtagc
ctgggcgcctggcaccggctgctggaaagcatcaatcgtcccgggctgatgcgcgaagac
ggctcgttgctgatcttcgagcgccccgactcccgtcaggccatcgacgccttgcaggca
cgcatgcgccagcaagcagtgccggtggattactggcaggccagtgcggtacagaaggta
gcgccgcaactcagcgaaggaattcagggcgggttgttctttccccgcaccgggcatttt
ctcgacccctaccgggtggtgtgtgaactggtggaagcggccaaggcctgcggggtgcaa
tttctcaagcactcggttttgggtgggaagctggatgagcacggtgtttcgctgaggacc
gaccaaggcgcggtcgcggcgcgtcaggtgttgatcgcctgcggtgcgcattcggccaaa
ttgaccgccgaactgaccggtaaaaaggtcccgctggatacagagcgcggttatcacttg
atgctacccaatgagcatgggcggctaccgttcgccgtcacgtcgctggagcgcaagttc
atcatgacgcccatggatggaggattgcggctggcaggtaccgtcgagtttgcaggcctc
gatcgcccgccgaacatggagcgcgcgtggcagttgcaccggctgagtcaggggctgttt
cgtcgtgatttgagtgccgaagatgcgacgccgtggatggggtttcgcccctccctgccg
gactcgctgcccatcatcgacaaggtgtgcgatggcaaggtcttgcttgcgtttgggcac
cagcatctggggctgacgcaggcggcggtgacggcggagttgattgcacagctggcaacg
tctgcgcccaacgggttgctggcacttgagccctatcggttagaccgtttctga

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