Pseudomonas yamanorum: AK972_3867
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Entry
AK972_3867 CDS
T05821
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pym03016
]
AK972_3867
Enzymes [BR:
pym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AK972_3867
Transfer RNA biogenesis [BR:
pym03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AK972_3867
Prokaryotic type
AK972_3867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMW84667
LinkDB
All DBs
Position
complement(4274373..4275227)
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AA seq
284 aa
AA seq
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MANIDNAAAEMAAAGFFRIALGVEYKGSRYRGWQRQASGVPTVQETLEKALSKVADSPVS
LMCAGRTDAGVHACGQVVHFDTQAERSMKAWVMGANINLPHDVSVSWAKVMPADFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDAERMAEAAQHLVGIHDFSAFRAGQCQAK
SPIKEVHHLRVTRHGKMIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAKEVLESRI
RRTGGVTAHPFGLYLVDVEYRDEFELPQRFIGPHFLTGFSELGG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatatagataacgcggccgccgaaatggcggccgcaggctttttcagaatcgcc
ctgggcgtggaatacaaaggctcacgctatcgcggctggcagcgccaggcctccggcgtg
ccgacggtgcaggaaaccctggagaaggccctgtcgaaggtcgccgactcaccggtgtcg
ctgatgtgcgccgggcgtaccgacgccggcgtgcatgcctgcgggcaagtggtgcacttc
gatacccaggccgagcgctcgatgaaggcgtgggtgatgggcgccaatatcaacttgccc
cacgacgtcagcgtcagttgggccaaggtgatgccggcggattttcatgcgcgcttcaag
gctatcgctcggcgttaccgctatgtgatttacaacgatcagatccgcccggcccatctc
aacgaagaaatcacctggaaccaccgcccgctggatgccgagcgcatggcggaggccgcc
cagcatctggtgggtatccatgatttcagcgcgtttcgtgccggccagtgccaggccaag
tcgccgatcaaggaagtccatcacctgcgggtgacgcgccacggcaagatgatcgtgctg
gatattcgcgccggcgccttcctgcaccacatggtgcgtaacatcgccggggtgctgatg
accatcggtaccggcgagcgtccggtggagtgggccaaggaagtcctggaaagccggatt
cgtcgcaccggtggcgtcacggcgcatccgttcggcctgtacctggtggatgtggagtac
cgcgacgagttcgaattgccccagcggttcatcgggccacacttcctcacaggtttcagc
gaacttggcggctga
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