Pseudomonas yamanorum: AK972_4171
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Entry
AK972_4171 CDS
T05821
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pym03032
]
AK972_4171
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_4171
Enzymes [BR:
pym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AK972_4171
DNA replication proteins [BR:
pym03032
]
Prokaryotic type
DNA Topoisomerases
AK972_4171
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AK972_4171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMW84971
LinkDB
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Position
complement(4606931..4609594)
Genome browser
AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIKMPWESSA
VVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVDEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSEILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDEKLVGLERV
QEPSEVEGEELEGEEGIALEGQVIGDADDGVDEPTLDAAADEEEPQE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcggtcgggcactgcctgatgcgcgcgatggc
ttgaagcccgtgcacaggcgtgtgctgttcgcgatgagcgagctgggtaacgactggaac
aagccgtacaagaaatctgcccgtgttgtcggtgacgtgatcggtaagtatcaccctcac
ggcgacactgcggtgtacgacaccatcgttcggatggcccagccgttttccctgcgctac
ctgctggtagacggccagggcaacttcggttcggtcgacggcgacaacgctgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggctgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtattcccaacctgttggtcaacggctccagcggtatcgccgtgggcatggccacc
aacatcccgccacacaacctcggtgaagtgatcgacggttgcctggccctcatcgacaac
cctgagctgaccgtcgatgagctgatgcaatacatccccggcccggacttcccgactgcc
gcgatcatcaacggtcgtgccggcatcatcgaagcttaccgtaccggtcgtggccgcatt
tacatgcgcgcccgctcgatcatcgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgaactgccttaccagttgaacaaggcgcgtctgatcgagaagatcgccgag
ctggttaaagagaagaaactggaaggcatcaccgaactgcgcgacgagtctgacaaagac
ggtatgcgcgtggtgatcgagctgcgtcgtggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccaaacccagctgcaaagcgtattcggtatcaacgtggtagcgctgatcgac
ggccgcccgcgcatcctgaacctcaaggatctgctggaagccttcgtgcgtcaccgccgc
gaagtggtgacccgccgtaccgtgttcgaactgcgcaaggcccgtgaacgcggccacatc
ctggaaggccaggcggttgcgttgtcgaacatcgacccggtcatcgccctgatcaaagcc
tcgccgaccccgtcggaagctaaagaagccctgatcaagatgccttgggaatccagcgcc
gtagtggcgatggttgaacgtgccggtgccgattcgtgccgtccggagaccctggaccca
caatacggcctgcgcgacggcaaatatttcctgtcgccggaacaggcccaggccattctg
gaactgcgtctgcaccgtctgaccggcctggaacacgagaagctgctggccgagtaccag
gagattctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgattcgcgccgaatacggcgacgtgcgccgcacc
gagattctcgatgcccgtctcgacctgaccctgggtgacatgatcccggaagaagatcgc
gtcgtgaccatctcccacggtggctatgccaagacccagccgttggctgcgtaccaggcc
cagcgccgtggcggtaaaggcaaatcggctaccggcgtcaaggatgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaatcccggaagcgtcccgcgccgcccgtggtcgtccgttg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgctgccggtggacgag
tacaccgaaggtcacttcatcttcatggccactgcgaaaggcaccgtgaagaagaccccg
ctggaatccttcagccgtcaacgcagcgtgggcctgatcgccctcgaactggacgaaggc
gacgtgttgatcagcgcagccatcaccgacggcgagcgtgaagtcatgctgttctccgac
ggcggcaaggtcacgcgcttcaaggaatccgacgttcgcgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgtctgccggaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagcgagatcctcactgcttccgagcgtggttatggcaagcgcaccgctatcagc
gagttcccggagtacaaacgtggtggccagggcgttattgccatggtcagcaacgaccgc
aatggccgtctggtcggcgcggtccaggtgctcgacggcgaggaaatcatgctgatttcc
gaccagggcaccctggtgcgtacccgggttgatgaagtgtctagcctggggcgtaacacc
cagggcgtgaccttgatcaagctggccaaggacgaaaaactggtcggcctcgagcgtgtc
caggagccatcggaagtggaaggcgaagagctggaaggtgaagaggggattgcactcgag
gggcaagtgatcggcgatgccgatgacggcgtcgacgagccaacactcgacgctgccgca
gacgaagaagaaccgcaggaataa
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