Pseudomonas yamanorum: AK972_4389
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Entry
AK972_4389 CDS
T05821
Name
(GenBank) tRNA (Uracil54-C5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pym03009
]
AK972_4389
Enzymes [BR:
pym01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AK972_4389
Ribosome biogenesis [BR:
pym03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AK972_4389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
PCMT
MTS
Methyltransf_11
Methyltransf_23
Methyltransf_15
RrnaAD
Methyltr_RsmB-F
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_4
DREV
TPMT
Motif
Other DBs
NCBI-ProteinID:
AMW85189
LinkDB
All DBs
Position
complement(4860815..4862167)
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AA seq
450 aa
AA seq
DB search
MAKHERGLRFQPTGGSRAPQIPVGKKQRLTIERLANDGRGIVFFEGRTWFVVGALAGEEV
EARVLGAHGKVVEARTERVFTASELRRPAPCVHAGRCGGCSLQHLPHDEQLALKQRMLAE
QLSRVAGVEPQEWAAPLSGPEFGYRRRARVAVRWDAKAKKLEVGFRAVASQDIVAIDDCP
VLVQALQPIMQRLPNMLRRLSKPQALGHVELFSGSSIAVLLRHMAPLSEADLTILQEFCT
FHEAQLWLHGEGQPQPFEPDQALGYRLEQWDLQLAYRPGDFVQVNAGVNEAMVAQALEWL
APKPDERVLDLFCGLGNFALPLARQVREVVAVEGVQAMVDRAAHNAVSNNLHNVQFFQAD
LSQPLTDAEWAKQGFSAVLLDPPRDGALEVVRKLATLGADRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacgagagaggcctgcgcttccaaccgacgggcggcagccgcgccccgcag
attcctgtaggcaagaagcagcgcctgaccatcgaacgcctggccaatgacggacgtggc
atcgtgttctttgaaggccgcacctggtttgtggtgggggcgctggccggcgaagaggtg
gaagcgcgggtgttgggcgcccatggcaaagtggtcgaggcccgcaccgagcgcgtattt
accgccagcgaactgcgccgcccggcaccctgtgtacacgccggccgttgcggcggttgc
agcctgcaacacctgccccatgacgaacagctcgccctgaaacagcgcatgcttgccgag
caattatcccgcgtggccggtgtcgaaccccaggagtgggccgcgcctttgagcgggccg
gaattcggctatcgccgccgtgcacgcgtggccgtgcgctgggatgccaaggcgaagaaa
cttgaagtcggctttcgcgccgtggccagccaggacatcgtcgccatcgacgattgtccg
gtgctggtacaggccttgcaaccgatcatgcagcggttgccaaacatgttgcggcgcttg
agcaaacctcaggcgttggggcatgtggagttgttcagcgggtcgtcgatcgccgtgttg
ttgcgacacatggcgcccttgtccgaagcggacctgacgatcctgcaggaattttgtact
tttcatgaagcgcaattgtggctgcatggagagggtcagccgcaacccttcgaaccggac
caggccttgggctatcgtctggaacagtgggatctgcagttggcgtaccgcccgggagac
tttgtgcaggtcaacgccggggtcaacgaggcgatggtcgcccaggccctggaatggctg
gcgccaaagcccgacgagcgggtgctggatttgttttgtgggttgggcaacttcgccttg
ccgctggcccgccaagtgcgggaagtggtggcggtggaaggcgtgcaggccatggtggac
cgggcggcacacaatgccgtcagcaataatttgcataatgtgcagttttttcaggccgat
ttgtctcagcctttgaccgacgcggagtgggccaaacagggcttttctgcggtactcttg
gacccaccccgcgatggtgccctggaggttgtgcgcaagctcgctaccctgggggctgat
cgcctggtgtatgtgtcctgcaatccggcaacgctggcgcgggacacggtcgagttggtc
aagcaaggctaccggctaaaacgtgccgggatcctcgacatgtttccccagacggcccat
gtcgaggccatggcgttatttgaagcgggctag
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