Pseudomonas yamanorum: AK972_4462
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Entry
AK972_4462 CDS
T05821
Name
(GenBank) Cyn operon transcriptional activator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_4462
Transcription factors [BR:
pym03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AK972_4462
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_28
HTH_5
HTH_20
MarR_2
HTH_23
HTH_11
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMW85262
LinkDB
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Position
complement(4938763..4939629)
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AA seq
288 aa
AA seq
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MLLRHIRYLLAVAEHRNFTRAAEALHVSQPTLSQQIKQLEETLGAPLLDRSGRSVSLTDA
GEAYVRFARLALQDLQAGTRAMHDVQDLSRGSLRLAMTPTFTAYLIGPLLARFNGLYPGI
TVSVEELTQDRMEAALTEDLLDIGIGFTGEHLPDIECEGVFVEALSVVVSADHADIGQQS
WLQQPLVLLNSGFATRRYIDEYFRSQAVKPLIAMEANSISAIIEIVRNTRLATILPSAIA
QVQPGLQAVPLSPALPQRTAALLSRKGAYRSAACRAFVELVRAQPTTD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtcatatccgctacctgttggccgtcgccgagcaccgcaatttcacccgg
gcggccgaggcgctgcatgtgtcgcagccgaccttgtcgcagcagatcaagcaactggaa
gaaaccttgggcgcaccgctgctggatcgctccggtagaagcgtcagcctcaccgacgcg
ggtgaggcctatgtgcggtttgcgcgcctggcgttgcaggatttgcaagccggcacccgc
gccatgcatgacgtgcaggacctgagccgtggcagtctgcgcctggccatgacgccgacg
tttaccgcttacctgatcgggccgttgctggcgcgttttaacggtttgtacccgggcata
acggtgagcgtcgaggagctgacccaggaccgcatggaggcagcgctgacggaggattta
ctggatatcggcatcggttttaccggcgagcatttgccggatatcgagtgtgaaggggtg
tttgtcgaggcgttgagtgtggtggtgagtgctgaccatgctgatatcggccaacagtcg
tggcttcagcaaccgctggtgttgctgaactcaggcttcgccacgcgccgctatatcgac
gagtattttcgcagtcaggcggtgaaaccgctgattgccatggaggccaattccatcagc
gcgattatcgaaatcgtacggaacacccggctggcgaccatcctgcccagcgcaattgcc
caggtacagccggggttgcaggcggtgccgctaagcccggcgttgccgcaacgcacggcg
gcgttgctcagtcgcaagggggcataccgtagtgccgcgtgcagggcatttgttgaattg
gtcagggcgcagccaaccactgattga
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