Pseudomonas yamanorum: AK972_4614
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Entry
AK972_4614 CDS
T05821
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00362
Benzoate degradation
pym01100
Metabolic pathways
pym01120
Microbial metabolism in diverse environments
pym01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AK972_4614
00624 Polycyclic aromatic hydrocarbon degradation
AK972_4614
Enzymes [BR:
pym01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
AK972_4614
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
SdrD_B
TTR_TEN1-4
DUF4198
Motif
Other DBs
NCBI-ProteinID:
AMW85414
LinkDB
All DBs
Position
complement(5092750..5093454)
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AA seq
234 aa
AA seq
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MSDKPGYRRPQAGTQPDYLHPAYQSTNLRSPSKPLVFLPHSLSEITGPTIGAERVNEKDN
DLTAQHEGEPQGERIIIHGRVLDENGLPVPGILVEIWQANAAGRYNHKRDQHDAPLDPNF
TGTGRTVTDAEGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSVLTRLVTQMYFPGD
PLLAYDPIYNCVPDTSAKERLIASFDLEKTIPHYALGYRWDIVLRGRDATPMEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagcccggataccggcgcccgcaagcgggtactcagcctgattacctgcac
ccggcctaccagtcgacgaacctgcgttcgccgtccaagccgttggtgttcctgccccat
tccttgtcggaaatcaccggcccgactatcggcgccgagcgcgtcaacgagaaggacaac
gacctgaccgcccagcatgaaggcgagccccagggcgaacgcatcatcattcacgggcgt
gtgctggacgaaaacggcttgcccgtgcccggcatcctcgtggaaatctggcaggccaat
gctgccggccgctacaaccacaagcgcgaccagcacgacgcgccgctggacccgaacttc
accggcaccgggcgcaccgtcaccgacgccgagggctggtaccagttccagaccatcaag
cccggcgcctacccgtggggcaaccatcacaacgcgtggcgcccggcgcacatccacttc
tcgctgttcggcccgagtgtgctgacgcggttggtgacgcagatgtatttccccggcgac
ccgctgctggcctacgacccgatctacaactgcgtcccggacacctccgccaaggagcgc
ctgatcgccagtttcgacctggaaaaaaccattccgcactatgccctcggctaccgctgg
gacatcgtcctgcgcggccgcgacgccacgccgatggagaaataa
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