Pseudomonas yamanorum: AK972_4707
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Entry
AK972_4707 CDS
T05821
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym03030
DNA replication
pym03430
Mismatch repair
pym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AK972_4707
03430 Mismatch repair
AK972_4707
03440 Homologous recombination
AK972_4707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pym03032
]
AK972_4707
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_4707
Enzymes [BR:
pym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AK972_4707
DNA replication proteins [BR:
pym03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AK972_4707
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AK972_4707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AMW85507
UniProt:
A0A143GMN6
LinkDB
All DBs
Position
complement(5190640..5194161)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKAAMGAG
IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGLIMLSAAKEGEIGIALLGGNPHEAEVLAREWMEVFPNRFYLEIQRTNRPNDEEQ
LHAAVALAEKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SADEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYANHRKAKD
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTDALKGDQLRWLGDLLKRHRGACPVTMEYTRDDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggtcgacggcctg
gtacggatcaaacccctggtcaaaaccctggtgggcatgaacatgcctgccgtggcggtg
actgaccagaacaacatgtgctccctggtcaagttctacaaggccgccatgggcgccggc
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaagacccggataacccattg
agccgcatcagcctgttggcgatgaacggcgtgggttatcgcaacctcaccgaactgatt
tcccgtggcttcatcgatggccagcgcaacggctcgatcatcatcgagcgcgaatgggtg
gccgaggccagcgaagggctgatcatgctctcggcggccaaagagggtgagatcggcatc
gcgctgttgggcggcaatccccacgaggcagaagtactcgcccgtgagtggatggaggtg
ttccccaaccgtttctacctggaaatccagcgcaccaaccgccccaacgatgaagaacag
ttgcacgccgccgtggccctggctgaaaagcttggtgcgccgctggtggcgaccaacgat
gtgcgctttatcaagaaggaagacttcgaggcccacgaaacccgcgtatgcattggcgaa
gggcgggcgctggacgatccgcgccgctcgaaaaactacagcgaagagcagtacctcaaa
agcgccgatgaaatggccgagctgttcagtgacctgcccgaggccctggaaaactccgtc
gaaattgccaagcgctgcaatattgaagtgaagctgggcaagcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgacgagtatttccgcaaggtgtccttcgacggcctg
gaggaacgcctgagcgtcctgttgcccaaggacaccactgaagattatgaagccaagcgc
caggtctacgtcgaccggctgaatttcgagctggatatcattatccagatggggttcccc
ggttacttcctgatcgtaatggactttatccagtgggccaaaagcaacggcgtgccagtg
ggcccaggccgtggatcgggtgccgggtcgctggtggcctatgtgcagaagatcaccgat
ctcgatccgctggaatatgacctgctgttcgaacgtttccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgcgaccgggttattgaatacgtg
gccgagaaatacggccgcaacgccgtaagccagatcatcaccttcggttccatggcggct
aaagcggtaatccgcgacgtggcccgggtgcagggcaagtcctacggcctggctgaccga
ctgtcgaagatgattccattcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgggacttcatcaaggtcgatgaagaagcggccgaaatctgggacatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggtaaacacgccggtggtgtggttatcgcg
cctaccaagctgactgacttttcgccgatctattgcgacgaagaaggcgacggcctggta
acccagttcgacaaggatgacgtggaggcggccggcctggtgaagttcgacttcctcggc
ctgcggaccctgacaatcatcgactgggcgctgaagaccatcaatcgggaccgcgccaag
gtcaacgagccaccgctggatatcgcgtttatcccgctggacgacaaaccgacctacagc
ctgctgcaaaaggctgaaaccacggccgtgttccagcttgaatcccgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccgggcccgctgcaatcaggcatggtggatgacttcatcaaccgtaagcacggacgt
gccgagctggcttacccgcactccgactaccagtacgaaggcctcaagccagtactggca
ccgacctacggcatcatcctgtatcaagaacaggtgatgcagattgctcaggtcatggcc
ggctataccctcggcggcgcggatatgctgcgtcgagccatgggtaagaaaaagcccgag
gagatggccaagcagcgcggtggcttcattgagggctgcgccaccaacaacatcgacgcc
gacctggccggtaacatcttcgacctggtagagaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagacggcctggctgaaggctcactac
ccggcgccgttcatggccgcggtactgtctgcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagctgcgcctcgacgcgccggacgtgaacacc
tccgagttcaagttcacggtcaacgacgaaggccgcatcatttatggtctcggcgcgatc
aagggcgtgggcgaaggcccggtggaggcgattaccgaagcgcgccaggacgggccgttc
aaggacctgttcgacttctgcgcccgggtcgacctcaagcgcatcaacaaacgtaccctg
gatggcttgatccgaagcggtgccctggatcgtctgggtccgtacttccatgatgagccg
aaggcttaccaggccaacatcgaccgcaatcgcgcggtattgctgaccgccatggaagaa
gcgatcaaggccgccgaacagaccgcgcgcacccacgacagcggccacgccgacctgttt
ggcgggctgttcgtcgaagaagacgccgacgtctacgccaaccatcgcaaggccaaggac
ctgaccctcaaggagcgcctcaagggagagaaggacaccctgggcctgtacctcactggt
cacccgattgacgagtatgaaggtgagatccggcgttttgcccgccagcgcatcatcgac
ctgaagccggcgcgggacacccagaccgtcgcgggcatgatcatcgcgctgcgggtgatg
aagaataaaaagggcgacaagatgggtttcattaccctcgacgaccgctcgggccgcatc
gaagcgtcgctgtttgccgatgcattccactccgcccagtcgctgttgcagaccgacgcg
atggtggtggtggaaggggaggtcagcaacgacgacttctccggcggcctgcgcctgcgg
atcaagcgcgtgatgagcatggaagatgctcgcaccaacctcgccgaaagcctgcgcttg
aaggtcaagaccgatgcgctcaaaggcgatcagctacgctggttgggtgacttgcttaaa
cgccatcgtggcgcctgcccggtgaccatggagtacacccgcgacgatgccaaggcgatg
ttgcagtttggtgagacgtggcgaattgatcccgctgatggcttgattcaagcattgcgt
gaccagttcgggcgtgacaacgtcttcctccaataccgttga
DBGET
integrated database retrieval system
