Pseudomonas yamanorum: AK972_4734
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Entry
AK972_4734 CDS
T05821
Name
(GenBank) N-succinyl-L,L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00300
Lysine biosynthesis
pym01100
Metabolic pathways
pym01120
Microbial metabolism in diverse environments
pym01230
Biosynthesis of amino acids
Module
pym_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AK972_4734
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pym01002
]
AK972_4734
Enzymes [BR:
pym01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AK972_4734
Peptidases and inhibitors [BR:
pym01002
]
Metallo peptidases
Family M20
AK972_4734
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AMW85534
UniProt:
A0A143GMZ5
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All DBs
Position
5223094..5224245
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLAIDLIRRPSVTPIDADCQKLMMQRLGDAGFALEPMRIEDVDNFWATH
GKHEGPVLCFAGHTDVVPTGPVKAWQNDPFDALIDENGMLCGRGAADMKGSLAAMLVASE
RFVTDYPDHKGSVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNTFFPPTSFQ
ISNLNSGTGATNVIPGDLTAVFNFRFSTESTVEGLQQRVAAILDKHGLDWHVEWALSGLP
FLTEPGALLDAVSASIKAVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctccaactcgctatcgacctgatccgtcgc
ccgtcggtgacgccgatcgacgccgattgccagaagctgatgatgcagcgcctgggcgac
gccggttttgcgcttgagccgatgcgcatcgaggatgtggataacttctgggccacccac
ggcaaacacgaaggcccggtattgtgcttcgccggccacaccgacgtggtgccgaccggt
ccggtcaaggcctggcagaacgacccgttcgacgcgctgatcgacgaaaacggcatgctc
tgcggccgtggcgcggccgacatgaaaggcagcctggccgcgatgctggtcgcctccgag
cgtttcgtcactgactacccggaccacaagggttcggtggctttcctgatcaccagtgac
gaagaaggcccggcacaccacggcaccaaggctgtgatcgaacgcctggcagcccgcaag
gaacgcctggactggtgcatcgtcggcgaaccgtcgagcaccaccctggtgggcgacgtg
gtcaagaacggccgtcgcggctccctcggcgccaccctgaccgtgcgcggcgtgcaaggc
catgtggcctacccgcacctggcaaagaacccgatccacctggccgctccggccctggcc
gaactggccgccgagcattgggacgacggcaacaccttcttcccgcccaccagcttccag
atttccaacctcaattccggcaccggcgccaccaacgtgatcccgggtgacctgacggcg
gtgttcaacttccgcttctccaccgagtccaccgtcgaaggcctgcagcagcgggtcgcg
gcgattctcgacaagcatggcctggactggcatgtggagtgggcgctgtcgggcctgccg
ttcctcaccgaaccaggcgcgttgctcgatgccgtctccgccagcatcaaggccgtcacc
ggccgcgagaccaaggcgtccaccagcggcggcacttccgacgggcgcttcattgcgacc
ctcggcactcaggttgtagagctgggcccggtcaacgcgaccatccatcaggtcaacgag
cgcattctcgccagcgacctcgatgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
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