Pseudomonas yamanorum: AK972_4773
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Entry
AK972_4773 CDS
T05821
Name
(GenBank) ABC transporter, periplasmic spermidine putrescine-binding protein PotD
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_4773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_4773
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AK972_4773
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
AMW85573
UniProt:
A0A143GMR5
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Position
5268091..5269242
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AA seq
383 aa
AA seq
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MSAHKTALLSALTTALLASVSIQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKNYDWVT
GFEKETGCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTSLIPNW
KNIDPRLKDAPWYVVGQQTYGTPYQWGPNVLMYNTNVFKTAPTSWNVVFEAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKATKPELGIQSPYELTETQYKAVLDLLRAQQPLIHRYWHD
TTVQMSDFKNEGVVASSAWPYQVNGLVNEKQPIASTIPKEGATGWADTTMLHAEAKHPNC
AYKWMDWSLQPKVQGDVASWFGSLPAVPAACKESELLGAEGCKTNGFDQFEKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacaagaccgcactgctcagtgccctgaccaccgcgctgctggccagtgtc
agtatccaggccgccgaaccgctcaaggcggtcggcgccggcgaaggccagttggatatc
gtcgcctggcccggctatatcgaacgtggcgaaagcgacaagaactacgactgggtcacc
ggtttcgagaaagagaccggctgcaaggtcaacgtcaagaccgccgccacctctgacgag
atggtgagcttgatggccaagggcggctacgacctggtcaccgcatccggcgatgcctcg
ctgcggctgatcgtcggcaagcgcgtacagccgatcaacacctcgctgattcccaactgg
aagaacatcgacccgcgcctgaaagatgcgccgtggtacgtggtcggccagcaaacgtac
ggcacgccgtaccagtggggcccgaacgtgttgatgtacaacaccaacgtgttcaagacc
gcgcccaccagctggaatgtggtgtttgaggcgcagaacctgccggacggcaagccgaac
aaaggccgtgtgcaggcctatgacggcccgatctacatcgccgatgcggcgctgtacctc
aaggccaccaagccggaactgggcatccagagcccgtacgagctgaccgaaacccagtac
aaggccgtgctcgacctgttgcgcgcccagcaaccgttgatccaccgctactggcatgac
accaccgtgcaaatgagtgacttcaagaacgaaggcgtggtggcctccagcgcatggccg
tatcaggtcaacggcctggtcaacgagaaacagccgattgcctcgaccattccgaaggaa
ggcgctaccggctgggcggacaccaccatgttgcacgccgaagccaagcacccgaactgc
gcctacaagtggatggactggtcgctgcagccgaaggtccagggtgacgtggcctcatgg
ttcggttcgttgccggcggtgcccgccgcgtgcaaggaaagcgaactactgggtgccgag
ggttgcaagaccaacggtttcgaccagttcgagaagatcgccttctggaaaaccccgcag
gctgaaggcggcaagttcgtgccgtacagccgctggacccaggattacatcgcgatcatg
ggcggccgctag
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