Pseudomonas yamanorum: AK972_4824
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Entry
AK972_4824 CDS
T05821
Name
(GenBank) Transglycosylase, Slt family
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pym01011
]
AK972_4824
Enzymes [BR:
pym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AK972_4824
Peptidoglycan biosynthesis and degradation proteins [BR:
pym01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AK972_4824
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
NMT1
Motif
Other DBs
NCBI-ProteinID:
AMW85624
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Position
5322095..5323429
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AA seq
444 aa
AA seq
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MRVVTRNSPATYFQDRNGETGFEYELVKRFADELGVKLEIETADNLDDLFSQIGKPNGPV
LAAAGLVSSEPRRQQVRFSHPYLEVTPQIIYRNGQSRPTTAADLVGKKIMVLKGSTHAEQ
LAQLKKQFPGIEYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAMNQVYFPNVRVAFDLG
DASHQAWAVASGEDNSLLNEVNSYLDKVEKNGTLQRLKDRYYGHVDVLGYMGAYTFAQHL
QQRLPKYEKHFRAYAKEEKVDWRLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMG
VSNRLDAKQSIMGGAKYLAKIKDELDDKIAEPDRTWFALAAYNVGTGHLDDARKLAEKEG
LNPNKWLDVKKMLPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGN
QVVEGNLHVPGVDKTKPTEETPQL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtggtcacccgaaacagcccggccacttatttccaggaccgtaacggcgaaacc
ggattcgaatacgaactggtgaagcgtttcgccgacgagctgggggtaaagctggagatc
gagaccgctgacaacctggatgacctgttctcacagatcggcaagcccaacggcccggta
ctggccgccgccggtctggtcagcagtgagccgcgccgccagcaagtgcgtttctcccat
ccgtatctggaagtcaccccgcagatcatctaccgcaacggccagtcccgcccgaccacc
gcagcagacctggtgggcaagaagatcatggtgctcaagggcagcacccacgccgaacaa
ctggcgcagttgaaaaagcaatttcccggaattgaatacgaagaatccgatgccgttgag
gtggtcgacctgttgcgcatggtggacgaagggcaaattgacctgaccctggtggactca
aacgaagtggcgatgaaccaggtgtacttccccaacgtgcgggtggcctttgacctcggt
gatgccagccatcaagcctgggcggtcgcctccggcgaagacaacagcctgctcaacgag
gtgaacagctacctcgacaaggtcgaaaagaacggcaccctccagcgtctgaaagatcgc
tattacgggcacgtggatgtactcggctacatgggcgcctacaccttcgcccagcatttg
cagcagcgcctgcccaagtacgagaaacacttccgcgcctatgccaaggaagaaaaggtc
gactggcgactgctggcggccatcggctaccaggaatcactctggcagccggcggtgacc
tccaagaccggcgtgcgcggcctgatgatgctgacccagaacaccgcgcaggccatgggc
gtgtccaaccgcctggacgccaagcagagcatcatgggcggcgccaagtacctggccaag
atcaaggatgagctggacgacaagattgccgagccggaccgcacctggtttgccctggcg
gcgtacaacgtcggcaccggtcacctggatgacgcgcgcaagctggccgaaaaggaaggc
ctgaacccgaacaagtggctggacgtgaagaaaatgctgccacgcctgtcgcagaagcag
tggtacagcaagacgcggtatgggtatgcgcgtggcggtgagcccgtgcactttgtggcg
aacatccggcgttactacgacattttgacgtgggtgacgcagccgcagctggaaggcaat
caggtggtggaaggcaacctgcatgtgccgggtgtggacaagaccaagccgactgaagaa
actccgcagctctaa
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