Pseudomonas yamanorum: AK972_4911
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Entry
AK972_4911 CDS
T05821
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_4911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_4911
Transporters [BR:
pym02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AK972_4911
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GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AMW85711
UniProt:
A0A143GNR6
LinkDB
All DBs
Position
complement(5419591..5420763)
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AA seq
390 aa
AA seq
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MITLRVLGTSVTLLECLRVRAEKELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSANDRLGSGSVPSERLFVQHDGSLGSTV
TERISMLPLTHNADSFAYRPERLPEGFNRANESWGWLLDPAWGARTALQSDAAIGALDAA
LAVQGAGLASFKDIGNMSIEEIDVLADILVRKQKEGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARSRDHLSSAEWDYWYAGLPAREELLGSDGLPLIDVGEVRDGGSYEQ
RMGHIAVWNSVMDEHNYLVRRWGDFMRARG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgcttcgcgtcctcggtacctcggtgaccttgctcgaatgcctgcgtgtgcga
gctgaaaaagagctgggcattcgcctggtgtaccaggtacacgatgtggagcaggcccag
cgcatcgcggtgatgcagccggacagctacgacctctacgaccagtggtttcacaacgtc
gatttcgtgtggccggcccgggcgatccagccgatcgacacccggcgcattgcgctgtgg
cacgagatcaacgacctgcccaagcgcggacgtttgtccgccaacgaccgcctgggcagc
ggcagtgtgcccagcgagcgcctcttcgtgcagcacgatggcagcctcggcagcaccgtg
accgaacgcatcagcatgttgcccctgacccacaacgccgacagtttcgcctaccgcccc
gagcgcttgcccgaagggttcaaccgcgccaacgagagctggggctggctgctcgacccg
gcctggggcgcacgcaccgcgctgcagagtgatgccgccatcggtgccctcgacgcggcg
ctggccgtgcaaggcgcggggctcgcgagcttcaaggacatcggcaacatgagcatcgaa
gagatcgatgtgctggcggatatccttgtacgcaagcagaaggaagggcacttcgcggcg
ttctggtcggatgacgaagaggcggcgcaattgatgctcagcccgagcatcgacatccag
agtttgtggtcaccgaccctgatgcgcctgcaccgggccggggtcaaataccgcttggcg
gtaccccgtgaaggttatcgcgcctggttcggcgggttgtcgttgtcgcgccatgccaag
ggcccggtgctggatgcggcctatgcttacctcaactggtggctgtccggctggccaggt
gcggtgatggcgcgccagggttattacatcggcaacccggcccgcagccgtgatcacctg
agcagcgccgagtgggattactggtacgccggcctgcccgcgcgggaagagctgttgggc
agcgatggcttgccgttgattgatgtgggcgaagtgcgcgacgggggctcctatgagcag
cgcatggggcacatcgcggtgtggaactcggtgatggacgagcacaactacctggtgcgg
cgctggggggatttcatgcgggcgcgtggctga
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