Pseudomonas yamanorum: AK972_4943
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Entry
AK972_4943 CDS
T05821
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pym03032
]
AK972_4943
03036 Chromosome and associated proteins [BR:
pym03036
]
AK972_4943
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_4943
DNA replication proteins [BR:
pym03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AK972_4943
Chromosome and associated proteins [BR:
pym03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AK972_4943
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AK972_4943
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
Motif
Other DBs
NCBI-ProteinID:
AMW85743
UniProt:
A0A143GN55
LinkDB
All DBs
Position
complement(5460199..5460480)
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AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAESTGATKVQVRAVIEQLSQIVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKSLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgatctggctgaatccactggcgccaccaaa
gttcaagtgcgtgcagtgattgaacaactgagccagatcgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtcctgcccgt
actggccgtaacccttcgactggcgctgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggcaaaaagcctgaccgacgctgttaacaagtaa
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