Pseudomonas yamanorum: AK972_5020
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Entry
AK972_5020 CDS
T05821
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_5020
Enzymes [BR:
pym01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AK972_5020
DNA repair and recombination proteins [BR:
pym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AK972_5020
Prokaryotic type
AK972_5020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMW85820
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All DBs
Position
5535134..5536579
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AA seq
481 aa
AA seq
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MHLIWLRTDLRLHDNTALAAAAQRGPTAAVYLISPEQWLAHDDAPCKVDFWLRNLKSLSV
ALGELNIPLLIRHASTWDQAPQVLADLCQELSVESVHVNDEYGIHEARRDAAVAETLEAR
GVTFHNYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYNRLHGALPRLVATPKAQATLKLK
SDPIPDYVEGFATPTEALRSLWPAGEAEARRRLDQFADAQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQSNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNSPEDLKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGEGVFIK
HWLPQLAALNKKEVHNPDAVGGLFGVADYPRPIVDLKKSRERALAAFRSLPSRQAVGGGY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgatctggctgcgcaccgacctgcgcctacatgacaacaccgccctcgccgcc
gccgcacagcgtggtccgacagcggctgtctacctgatcagtcccgagcaatggctggcc
cacgatgacgcgccgtgcaaagtcgacttctggctgcgcaacctcaagagcctgagcgtc
gcgctgggggagttgaacattcctctattgatccgccatgcctcgacctgggaccaggca
ccacaagtcctggcagacctgtgccaggaactgtcggtcgagtcggtgcacgtcaatgac
gaatacggcatccacgaagcgcgccgcgacgccgccgtggccgagaccctcgaagcccga
ggcgttacgtttcacaattacctggaccagttgtttttccagcccggcagcgtcctgacc
aagaccggcacgtacttccaggtgttcagccagttccgcaaggtctgctacaaccgtctg
cacggcgccttgccgcgcctggtcgcgacacccaaggcacaggcgacactcaagctcaaa
agcgacccgatcccggattacgtcgagggttttgcaacgccgaccgaagccttgcgctcc
ctgtggccggcgggtgaggccgaagcccggcgccgtctcgatcaattcgccgacgcgcaa
atcagctactacaaggacgaacgcgatttcccggccaagcccggcaccagccagctttcg
gcctacctggccgccggtgtggtttcgccgcgccaatgcctgcatgccgcgctgcaaagc
aaccagggcgaattcgaaagcggcgacatcggcgcgattacctggatcaacgagctgctg
tggcgcgagttctacaaacatatcctggtgggttacccacgggtctcacgccaccgcgca
ttccgcccggagactgaagcagtggcctggcgcaacagtccggaagacttgaaggcgtgg
caggaagcccgcaccggcctgccgatcatcgacgcggccatgcgccaattgctggaaacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgactaaaaacctgctg
atcgactggcgcgaaggcgagcgttttttcatgcgtcacctgatcgacggcgacctcgcg
gcgaacaacggtggctggcagtggagctcgtccaccggcaccgactcggcgccgtacttc
cggattttcagccccttgagccagtcggaaaaattcgacggtgaaggcgtgttcatcaag
cattggctgccacaactggcagcgcttaacaaaaaggaagtgcacaaccccgatgccgtg
ggcggcttgtttggcgtggcggactaccctcgtcctatcgtcgatctgaaaaagtcccgc
gagcgcgcgctcgccgccttccgcagcctgccttcacgccaggcggtcgggggtggttat
gagtga
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