KEGG   Pseudomonas yamanorum: AK972_5049
Entry
AK972_5049        CDS       T05821                                 
Name
(GenBank) Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)
  KO
K03219  type III secretion protein C
Organism
pym  Pseudomonas yamanorum
Pathway
pym03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pym00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AK972_5049
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pym02044]
    AK972_5049
Secretion system [BR:pym02044]
 Type III secretion system
  Type III secretion core apparatus
   AK972_5049
SSDB
Motif
Pfam: Secretin Secretin_N TraK_C
Other DBs
NCBI-ProteinID: AMW85849
UniProt: A0AAJ3LIT5
LinkDB
Position
5559320..5561458
AA seq 712 aa
MSNKNYKLPRLRADSPADRTKRAHWRGLILLPWLLTPLESTLAAVPSEWKNTAYAYEAEH
KPLREVLEDFAQSFGTQLQIDGLLEGNVNGKIRANTPQSLLDRLGVEHRFQWYLYNNTLY
ISTLDQQESARLEVSSETLADLKQALTDIGLLDSRFGWGELSDDGVVLVSGPKRYIEQIK
QFSSQRKSPDEKQSILTYPLKFANAADRPIDYRGEKLTIPGVASMLRGLLEPRPASTLST
LSQRPASASQPSPITPSFPRLGNPMLGQMLGPAINPGQLDSGLSLTPRAPVSASRIRVEA
DVRNNAVLIYDLPERQAMYRELIAQLDVARKLVEIDAIILDIERTQLREFGVNWGFQNSR
FRGGVSMAPGTSSQLSIAHRDRFYADIRALEQRGLATMVSNPSVLTLENQPAVIDFNRTQ
YLTAGTEVANILPITVGTSFQVVPRVITSRGQHQIHLVVDIEDGNFDESNPERIGPDVRR
GKVSTQAVMAEKRSLVVGGFHVTERTDKQNKVPLLGDIPLLGKALFSSTERQNNRRERLF
ILTPRVIGDQADPSRYLPQEDQAELQAALKPLTRRYAEHQPVIKRSDITSTLAHLVSGQV
PKAFKAAPMPLGLDTLCATRDLLALNTERTQWYAGPQFNVAVVVLRNQFNRHVRIDEKEC
SNSQTLAVSVWPRAWLKPGEEAEVFIAMRPVIKDEHIGVPRPSLLTPARSTP
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgtctaacaagaattacaagctccctcgcttgcgcgccgactcgcctgcagaccgcaca
aaacgagcccattggcgtggcctgatcttgctgccctggttgctgaccccgttggaaagc
accttggccgccgtccccagtgaatggaaaaacaccgcctacgcgtatgaagccgaacac
aagccactgcgggaagtactggaagatttcgcccagtcgtttggcacacaactgcaaatc
gacggcctgctggaaggcaacgtcaacggcaagatacgcgccaataccccgcaatcgctg
ctcgacaggctgggcgtggagcatcgcttccagtggtacctgtacaacaacaccctatac
atcagcaccctggaccaacaggaatcagcgcgcctggaagtctcttccgagaccctcgcc
gacctcaagcaggccctgaccgatattggcctgctggacagccggtttggctggggtgag
ttgtccgacgatggcgtggtactggtttcgggccccaagcgctacattgagcagatcaag
caattcagcagccagcgcaaatctcccgacgaaaagcagagcatcctcacctacccgctg
aagttcgccaacgcagcggaccgcccgattgattatcgcggtgaaaagctgaccattccc
ggcgtcgccagcatgctgcgcggtttgttggaacctcgccccgcctccacgctctcgact
cttagccagcgcccagcctcagcctcacaaccctcgcccatcacgccgagctttccacgg
ctgggcaacccgatgctggggcagatgctcggcccggcaatcaacccggggcagttggac
agcggcctgtcgctcaccccacgggcgccggtgtccgccagcagaatccgggtcgaggcc
gacgtgcgcaacaacgccgtgctgatctatgacctgccggaacgccaggcgatgtaccgc
gagctgatcgctcaactcgacgtcgcccgcaagctggtggaaatcgacgcaatcatcctc
gatatcgaacgcacccaattgcgcgaattcggggtcaactggggctttcaaaacagccgc
tttcgtggcggcgtaagcatggcccccgggacctcctcgcagctgtcgatcgcacaccgt
gaccgtttctatgccgacatacgcgcgttggaacaacgtggcctggcgacgatggtgtcc
aacccgtcagtgctcaccctggaaaaccagccggcggtgattgacttcaaccgcacccaa
tacctgacggccggcaccgaagtcgccaacatcctgcccatcacggtaggcaccagtttc
caggtcgtgccccgggtgatcacctcccgcggccagcaccagatccatctggtggtggat
atcgaggacggtaacttcgatgagtccaaccccgagcgcatcggccctgatgtgcgccgg
ggcaaggtcagcacccaggcggtgatggcggaaaaacgctcgctggtggtgggtgggttc
catgtcacagaacgcaccgacaagcagaacaaggtaccgctgctgggcgacataccgttg
ctgggcaaggcgctgttttcctccaccgaacgccagaacaaccggcgcgagcgtctgttt
atcctgaccccgcgagtcatcggcgatcaggccgacccttcacgctacttgccccaggaa
gaccaggccgaactgcaggcggcgctcaagcctctgacaaggcgctatgcggagcatcaa
ccggtgatcaagcgcagcgacatcaccagcaccctggctcacctcgtcagcggccaagtg
cccaaggccttcaaggcggcgccgatgccacttggcctggataccttgtgcgccacccgg
gacctgttggccctcaataccgagcgcacccagtggtatgccggcccgcagttcaacgtg
gccgtggtggtgctgcgcaaccagttcaatcgccacgtgcgcatcgatgaaaaggaatgc
agcaactcccagaccctggcggtgagcgtctggccacgtgcctggctcaagccgggtgaa
gaggctgaagtgtttatcgccatgcgccctgtcatcaaagatgagcacatcggcgtgccc
cgcccttccctgctcacgccagcccggagcaccccataa

DBGET integrated database retrieval system