KEGG   Pseudomonas yamanorum: AK972_5178
Entry
AK972_5178        CDS       T05821                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pym  Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:pym00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pym02048]
    AK972_5178
Enzymes [BR:pym01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AK972_5178
Prokaryotic defense system [BR:pym02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AK972_5178
SSDB
Motif
Pfam: SWI2_SNF2 ResIII T1R_D3-like HSDR_N DEAD V_ATPase_prox
Other DBs
NCBI-ProteinID: AMW85978
LinkDB
Position
complement(5713551..5716760)
AA seq 1069 aa
MADSKEAQFQRDIIDALAAQGWLVGSASCYDRRTALYTEDVLGYFKDAWPERWDKFAKAN
PNNPDDVLVQKLVRELEQSGTLDVLRHGFKLPAVKLELCSFQPDHGMNPDTLKRYQCNRL
RVVPEVSYSPHAREAGSVGQSYNPRLDLVLFVNGIPTATLELKSEFKQSVENAKRQYRYD
RPVKDPLTRKPEPLLTFNRGALVHFAVGQNEVAMTTKLAGTDTFFLPFNLGSAEGGAGNP
MPEDDSQYATSYLWQRLLQPDAWLKVLGRFLHLEKKTSEGFDGTPVTKETMIFPRYHQWE
VVNTLINTTRAEGPGRRYLIQHSAGSGKSNSIAWTAHQLASLYDDAGQRLFNSVIVITDR
TVLDKQLQDTIYQFEHAQGVVKQINRETSSQSKSEQLAEALAEQTRIIIVTIQTFPALFD
ALDKYPKLASGRYAVIADEAHSSQTGSSASKLKQILGSDALEGEEVTAEELLDAAVQARQ
PNERISYYAFTATPKAKTLELFGRPADPALPTSAGNKPEAFHLYSMRQAIEEGFILDVLR
NYTTYSTAWKIAHPDGEDDEVDSKKARIKLARWVRLHPYNISQKVEVIVEHFRANIRGLL
NGQAKAMVVTSSRQEAVRYQLALKAYVQQMGYNDVHPLVAFSGSVLPDEVIHEEVTESSS
LLNAGLNGRDLAQAFDTQDFNVMIAANKYQTGFDQPKLCAMYVDKKLQGVDCVQTLSRLN
RTFGDSKETFILDFFNEPQDILDAFLPYYTKAELTDVTDPQIIYDLQKKLDAEGIYHWQE
VEAFAMAFFDPKAAASKLSYYCTPAKERFARRYAFSVESRQQALDFKRTAEANGDSAGQK
KAEHALKEVGEQVDQLDLFRKNLQSFVRLYEFLSQIVPYEDRELEQLCVYAKHLHPLLRV
DRLQQDDVDVGELQLSHYRLSKRAEHQLRLSEGEGEYKLKPGSDVGSGKPHDPEKKRLSE
IIDALNDIFGAEVSDDDQLQFLTGIAQRISRQEDVMAQVNNHSVEQVMHGLFPKRVLDTV
LDAMTDHEKLSLEVLDNETKSRAFALVILKMLKTAAGLDESGLRGGQQG
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggcggacagcaaggaagcgcagtttcaacgagacattatcgacgccttggccgcccaa
ggctggctagtcggctcagccagctgctacgaccgacgcacggcgctgtataccgaggat
gtgcttggctatttcaaggacgcctggccggagcgctgggacaagttcgctaaggccaac
ccgaacaacccagatgatgtgctggtgcaaaagctggttcgcgagctggagcagagcggc
accctcgacgtgctgcgccacggcttcaagctgccggcagtaaagttggagctgtgcagc
ttccaacccgaccacggcatgaacccggacaccctcaaacgctaccagtgcaaccgcttg
cgcgtggtgccggaggtgtcctactcgccgcatgcgcgggaagccggtagcgtcgggcag
agctataacccacggctggacctggtgctgttcgtcaacggcatccccaccgccacgctt
gagctgaaaagcgagttcaagcagtcggtggaaaacgccaaacgccagtaccgttacgac
cgcccggtaaaagacccgctcacgcgcaagcccgagccgctgctgaccttcaaccgcggt
gcgctggtgcactttgccgtgggccagaacgaggttgcgatgaccaccaaactggcgggt
acagacaccttttttctgccgttcaacctcggcagcgccgaaggcggcgcgggcaacccg
atgcctgaggatgacagccaatacgctaccagctacctgtggcaacggctgctgcagccg
gatgcctggctcaaggtgctggggcgctttctgcacctggagaagaaaaccagcgaaggc
ttcgacggcacgcctgtgaccaaggagacgatgatcttcccgcgttaccaccagtgggaa
gtggtcaacacactgatcaacaccacccgcgcggaagggccaggcaggcgctacttgatc
cagcacagcgccggctcgggcaagtccaactccatcgcctggaccgcccatcaattggcc
tcgctgtacgacgatgccggccaacggttgttcaactcggtgatcgtgattaccgaccgc
accgtgttggataaacagctgcaggacaccatctaccagttcgaacatgcccaaggcgtg
gtcaagcagatcaatcgtgaaaccagcagccagagcaagtccgagcagttagccgaggcg
ctggccgagcagacgcgcatcatcatcgtcaccatccagaccttcccggcactgttcgat
gccctggacaagtaccccaagctggccagcgggcgctatgcggtgatcgccgacgaggcg
cattcctcgcaaaccggctcatcggccagcaagctgaaacaaattctcggcagtgatgcc
ctggaaggggaagaagtcaccgccgaagagctgctggacgccgccgtgcaggcgcgccaa
ccgaatgagcgcatcagctactacgcctttaccgccacgcccaaggccaagaccctggag
ctgtttggtcgcccagccgacccagcgctgccgaccagtgccggcaacaagcccgaggct
tttcacctgtactccatgcgccaggccattgaggagggttttatcctcgacgtgctgcgt
aactacaccacctacagcaccgcctggaagatcgcccatccggatggcgaagacgacgag
gtggatagcaagaaggcgcgcatcaagctggcgcgttgggtgcgcttgcacccgtacaac
atcagccagaaggttgaggtgatcgtcgagcacttccgcgccaatatccgtggcctgctg
aatggtcaggctaaggccatggtcgtcaccagcagccgtcaggaagcggtgcgttaccag
ttggcgttgaaggcttacgtgcagcagatgggttacaacgatgtgcacccgctggtggcg
ttctccggcagcgtgttgccggatgaggtaatccacgaagaggtgacggaaagcagcagc
ctgctcaacgccggcttgaatggccgcgacctggcgcaggcgttcgacacccaggacttc
aacgtgatgatcgccgccaacaagtaccagaccggcttcgatcagcccaagctgtgcgcc
atgtacgtggacaaaaagctgcaaggtgtagactgcgtgcagaccctgtcgcggctgaac
cgcaccttcggtgacagcaaggaaaccttcatcctcgacttcttcaacgagccgcaggac
atcctcgacgccttcttgccgtactacaccaaggccgagctgaccgacgtgaccgacccg
cagatcatctatgacctgcagaagaagctggatgccgagggcatctatcactggcaggag
gtcgaggcgttcgctatggccttcttcgaccccaaggcggccgccagcaagctcagctac
tactgcacgccggccaaggagcgctttgccaggcgttatgccttctccgttgagtcgcgc
cagcaggcgctggacttcaaacgcaccgccgaggccaatggcgacagcgccggccagaaa
aaggccgagcacgcactgaaagaggtcggcgagcaggtggaccagctcgacctgttccgc
aagaacctgcagagctttgtgcgcctgtatgagttcctctcgcaaatcgtgccttatgag
gaccgcgagctggagcagctgtgtgtgtatgccaagcacctgcacccgctgctgcgcgtg
gatcgcctgcaacaagacgacgtggacgtgggcgagctgcaactgagccactaccgcctg
agcaagcgagccgagcaccaactgcggctgagtgagggggaaggcgaatacaagctaaag
ccgggtagcgatgtgggcagcggtaagccgcatgacccggagaagaagcgcctgtcggaa
atcatcgacgcgctgaacgatatcttcggtgccgaggtgagcgatgacgaccaactgcag
ttccttaccggtatcgcccagcgcatcagccgtcaggaagatgtgatggctcaggtgaac
aaccactcggtggagcaagtaatgcacggcctgttccccaaacgcgtgctggacactgtg
ctagatgccatgaccgaccacgaaaagctgtcactggaagtgctggataacgaaactaag
agccgggcgtttgcgctggtgattttgaagatgctgaagacggcagccgggctcgatgag
agtggcttgcgcggcggccaacaaggttaa

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