Pseudomonas yamanorum: AK972_5196
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Entry
AK972_5196 CDS
T05821
Name
(GenBank) Transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pym03000
]
AK972_5196
Transcription factors [BR:
pym03000
]
Prokaryotic type
Helix-turn-helix
Other families
AK972_5196
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AMW85996
LinkDB
All DBs
Position
complement(5747337..5748197)
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AA seq
286 aa
AA seq
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MDILYQIRARQDSFSAGEGRIAKLMLDDVGFAASASLEALSQRAEVSTATLSRFARSVGC
RDLRDLRLQLAQASGVGSRFLDPAGLPEQSAFHRQILSDIESTLRRHLSGFNQRSFIDAV
SLLGKARMIHAFGMGGPSSLCSDELQVRLVRLGYSIAACHDPVMMRVTAATLGQEHALIV
CSLTGITPEVLGVVALARNYGAKIIAITLPDSPLAQLADVLLPLQPAETSFIYKPTAARY
GMLLAIDVLATELALAMPDDNQERLRRIKLALDDYRGGPDSLPLGD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctctaccagatccgcgcccgccaggattccttcagcgccggcgaagggcgt
atcgccaagttgatgcttgatgacgtcggctttgcagcgtccgccagcctggaagcattg
tcccaacgggccgaggtcagcaccgccaccttgtcgcgttttgcccgcagcgtcggttgc
cgcgacctgcgtgacctgcgcctgcaactggcccaggccagcggtgtcggcagccgcttt
ctcgacccggcgggcctgcctgagcagtcggcctttcaccggcagattctcagcgatatc
gaatcgacgttgcgccggcatttgtccggtttcaaccagcgcagttttatcgacgccgtg
agcctgctgggcaaagcgcggatgatccacgcgttcggcatgggcgggccatcgagcctg
tgcagcgatgagttgcaagtgcgcctggtgcgcctgggctactcgattgccgcctgccac
gacccggtgatgatgcgcgtgaccgccgccaccctgggccaggagcatgcgctgatcgtc
tgctcgctgaccggtatcaccccggaagtgttgggagtggtggcgctggcgcgtaactac
ggcgcaaaaatcatcgcgatcaccttgccggattctccgctggcgcagttggccgatgtg
ctgctgccgctgcaaccggcggaaaccagttttatctacaagccaacggcggcgcgctac
ggaatgctgttggccatcgacgtgctcgctaccgagctggccttggccatgcccgacgac
aatcaggaacgcctgcgacggatcaagctggccctggacgattatcgcggcggccccgac
agcctgccgcttggagattga
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