Pseudomonas yamanorum: AK972_5226
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Entry
AK972_5226 CDS
T05821
Name
(GenBank) Inner membrane protein YfiN
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AK972_5226
Enzymes [BR:
pym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
AK972_5226
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
AMW86026
UniProt:
A0A143GQ54
LinkDB
All DBs
Position
complement(5776884..5778152)
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AA seq
422 aa
AA seq
DB search
MSIDKGPVRPTLRSVIGRGHLSLALLAVGMASISLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFNDSAAATEALAVIASEEEVAEAEVFNVEGKQLAHWERPETGMLSMIELQLAH
ALLEQPITQPILHQGQVIGSVHLTGHGGSLLRFLLSGLAGILVCTALSAWVALYLARRLL
RGITGPLHSLASVAHAARSERAFDRRVPPAKIAELDSLGNDFNALLDELEAWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRSAAKLNEKVAVLFLDSDRFKDINDNFGHAA
GDAVLVAVATRIRAQLREDDLVARLGGDEFAILLSPLHRLEDAQRIAEKIIASMDAPIAL
PGDAHVLTSLSIGIAVYPDHGATPGNLLNAADAAMYQAKRLSQGGQQTAESESPAANVQH
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgataaagggccagtgcggcctaccttgcgttcggtgatcgggcgtgggcac
ctgagcctggcgctgctggcagtcggtatggcgagtatttccctgaccctgctcggcgtg
ctcgcgctacgggtgtatgccgaccacaacctgcacctgatcgcccgctccatcaactac
accgtggaagcggcggtggtgttcaacgacagcgcggcggccactgaagcattggccgtg
attgcctcagaagaagaggtggccgaggccgaagtcttcaacgttgaaggcaagcaactg
gcacattgggagcgcccggaaaccgggatgctgtcgatgattgagcttcagttggcgcat
gccttgctcgagcagcccatcacccagccgatcctgcaccagggccaggtcatcggcagc
gtgcacctgacaggccacggcggcagcctattgcgcttcctgctcagcggcctcgccggg
atcctggtgtgcaccgccctcagcgcctgggttgcactgtacctggcgcggcgtctgtta
cgcggcatcacggggccgttgcacagcctggcctcggtggcccacgccgcccgcagcgag
cgagcgtttgaccggcgcgtaccgccggcgaaaatcgccgaactcgacagcctgggcaac
gacttcaatgccttgctcgacgaactggaagcctggcagacccacctgcaaagcgaaaac
gaaaccctcgcccaccaggccagccacgacagcctgaccggtctgcccaaccgtgcgttt
ttcgaaggccggctgatccgcgccttgcgcagcgccgccaagctcaacgagaaagtggcg
gtattgttcctggacagcgaccgcttcaaagacatcaacgacaacttcggccatgccgct
ggcgatgcggtattggtggcagtggccacgcgcattcgtgcgcaactgcgcgaagacgat
ctggtggcacgcctgggcggcgatgaattcgccatcttgctgtcacctctgcacaggctc
gaggacgcccagcgcattgccgaaaaaatcatcgccagcatggacgcgcccattgcgctg
cccggcgacgcccacgtattgacctcactcagtatcggcatcgccgtctaccctgatcat
ggcgccacccccggtaacctgctcaacgccgccgacgcggcgatgtaccaggccaaacgg
ctctcccagggtggtcagcaaacggcggaatccgagtctcccgccgccaacgttcaacac
aggagttga
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