Pseudomonas yamanorum: AK972_5428
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Entry
AK972_5428 CDS
T05821
Name
(GenBank) Hydroxymethylpyrimidine phosphate synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00730
Thiamine metabolism
pym01100
Metabolic pathways
pym01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AK972_5428
Enzymes [BR:
pym01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AK972_5428
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AMW86228
UniProt:
A0A143GPR1
LinkDB
All DBs
Position
complement(6020196..6022100)
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AA seq
634 aa
AA seq
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MSIELKSQKSKNTVHLSESAKVDSGSVQPFTRSQKIYVQGTRPDIRVPMREVSLDVTPTD
FGGEINAPVVVYDTSGPYTDPNVIIDVRKGLGDVRSPWIESRGDTERLSGLSSHFGQQRL
SDAELTALRFAHVKNPRRAKAGANVTQMHYARKGIITAEMEYVAIRENMKLEEARAAGLL
DQQHAGHSFGASVPKIITPEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIG
NSALGSSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALE
KVGGAAEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAK
WCLAHHKENFTYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTK
IAWKHDVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIG
AAMIGWFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALS
KARFEFRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYA
ANQRIEAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaattaaaaagccaaaaatcaaaaaacaccgtgcacttgagcgaatcggcc
aaggtcgactccggttccgtgcagccgtttacccgctcgcaaaaaatctacgtccagggc
acccgtccggatatccgcgtgccgatgcgtgaagtcagccttgatgtgacccccaccgac
tttggcggcgaaatcaacgcgcccgtggtggtctacgacacctcaggcccctacaccgac
ccgaatgtgatcatcgacgtgcgcaagggcctgggcgatgtgcgttcgccgtggatcgaa
tcccgtggcgacactgagcgcctgtcgggcttgagctcgcacttcggccaacagcgcctg
agcgatgccgagctgaccgcgctgcgcttcgcccacgtgaagaacccgcgccgcgccaag
gccggggctaacgtcacgcaaatgcactacgcccgcaaaggcatcatcaccgccgagatg
gaatacgtcgccatccgcgaaaacatgaagctggaagaagcccgtgccgccggcctgctg
gaccagcaacacgccggccacagcttcggcgccagcgtgccgaaaatcatcaccccggaa
tttgtgcgcgaagaaatcgcccgcggccgcgcgatcatcccggccaacatcaaccacacc
gaactggaaccgatgatcatcggccgtaacttcctggtgaagatcaacggcaacatcggc
aacagcgccctggggtcgtccatcgaagaagaagtggcgaaactgacgtggggtattcgc
tggggttcggacacggtgatggacctgtccaccggcaagcacatccatgaaacccgcgag
tggatcatccgcaactcgccggtgccgatcggtaccgtaccgatctaccaggccctggaa
aaagtcggcggcgccgctgaagacctgacctgggagctgttccgcgacaccctgatcgaa
caggccgagcagggcgtcgactacttcaccatccacgccggcgtgttgctgcgttatgtg
ccgctgaccgccaagcgcgtcactggcattgtctcccgtggcggctcgatcatggccaag
tggtgcctggcgcaccacaaagagaacttcacctacacccatttcgacgaaatctgcgaa
atcatgaaggcctacgacgtcagcttctccctgggagatggcctgcggccgggttcgatt
gccgacgccaacgacgccgcacaattcggtgaactggaaaccctcggcgaactgaccaag
atcgcctggaagcacgacgtgcaaaccatgatcgaaggcccgggccacgtgccgatgcag
ctgatcaaggagaacatggacaagcagctggagtgctgcgacgaggcgccgttctacacc
ctcggcccgctgaccaccgacatcgcgccgggttatgaccacatcacctcgggcatcggg
gcggcgatgatcggctggttcggttgcgccatgctctgctacgtcacgccgaaggaacac
ttgggcctgccgaacaaggatgacgtaaagaccggtatcatcacctacaagattgcagcg
catgcggcggacttggccaaggggcatccgggggcgcagattcgtgacaacgcattgagc
aaggcgcgcttcgaattccgctgggaagaccagttcaacctgggcctggacccggacacc
gcgcgttcgtaccacgatgaaaccttgccgaaggactcggccaaggtcgcgcatttctgc
tcgatgtgcgggccgaaattctgctcgatgaaaatcacccaggaagtgcgtgagtacgcg
gccaaccagcgcattgaagcggtggacgtggacgtggccaagggcctggcggagcaggcg
gagcggttcaagcaggaaggtagtcagctgtacaaaaaggtctga
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