Pseudomonas yamanorum: AK972_5438
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Entry
AK972_5438 CDS
T05821
Name
(GenBank) Oligosaccharide repeat unit polymerase Wzy
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00540
Lipopolysaccharide biosynthesis
pym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AK972_5438
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pym01005
]
AK972_5438
Enzymes [BR:
pym01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
AK972_5438
Lipopolysaccharide biosynthesis proteins [BR:
pym01005
]
Core region
AK972_5438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wzy_C
Kdo
APH
Peptidase_M50B
Motif
Other DBs
NCBI-ProteinID:
AMW86238
LinkDB
All DBs
Position
6033533..6035410
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AA seq
625 aa
AA seq
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MQSKRLTYGSNRVFDFLCLWILPIGLLLLLSALFFVTNRNVLHRFYYLLFAAPTLLLLCL
RPTELKQVLREPLAIAFVVFSGWALISLFWSPEPTIDSDLFKRPPNTFTLFAGLGLLLHY
RNELFKPIFFCAALIALISSACSLVAFAPHFAEGARMIGGRGALDNALLSSHVFGFFCVY
WLYVCMTTKRAHVLWFSVPALAIMAAAVLATGSRTPLVALVLAVLWMSFTTRNRRAALLI
AGMVLSAAALLLFYPELITNRGSSFRFELWGMSLERIAEHPWIGHSYDSELYLTLADGYQ
LREPHSFALGVLYYVGIIGFIPWAFMLGWGLYKSLKERAQPLFILASSLLAYGIGAGLTE
GGGILSRPKEHWFLLWIPLALIAGLSIAQRRRSLLRMPVQRLKPQDFEQLCANAHVIEAD
GLGPKVLRLEDGSFLKLFRPRRWYTSGSFNPYSERFASNSEQLRALGIPSPVILNLYQLK
DASSAVRYQPLPGLTLRQALQSLDSSLRESLIERFGRFMAQLHERGVYFRSLHLGNVLLM
DDGEFGLIDVADMRIYPSALRNALRQRNLRHMQRYPQDRNWLFETHFEQLAKGYASVASP
SATAKIREQVLKLNNPVAQVASPAK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaagcgccttacatatggctcaaaccgcgttttcgacttcctctgtctgtgg
attctgcccattggcttgttgctgctcctgagtgcgctgttcttcgttaccaatcgaaat
gtgctgcacaggttttactacctgctgttcgccgcgccgacactgttgctgctgtgcctg
cgcccgacggaactcaagcaggtattgcgcgagcccctggcgattgccttcgtggttttc
tcgggctgggcgctcatcagcctgttctggagccctgagcccacgatagactccgacttg
ttcaagcggccaccgaataccttcacgttgtttgccggtttgggactgttgctgcattac
cgcaacgagctgttcaagccgatcttcttctgcgccgcgctgattgcactgatctccagt
gcctgcagcctggtggcttttgccccccacttcgcggagggcgcgcgaatgatcggcggg
cgcggggctcttgataatgcgctactgagctctcatgtattcggattcttctgcgtctac
tggctgtacgtatgcatgaccaccaagcgtgcgcacgtactctggttcagcgttccggca
ctggcaatcatggccgctgcagtgctggccaccggctcaagaacgccgctggttgccctg
gtcctcgccgtactctggatgagtttcaccactcgcaatcggcgcgcggccctgctgatc
gccggcatggtgctgagcgcggcggcgttattgctgttctatcccgagctgatcaccaat
cgcggcagttccttccgcttcgaactctggggcatgtcgcttgagcgtatcgccgaacac
ccctggatcggccacagctacgactcagagctgtacctgacgcttgccgacggctatcaa
ctgcgcgaaccccacagctttgcccttggcgtgctgtattacgtcggcatcatcggcttc
atcccatgggccttcatgctcggctggggcctgtacaaaagcctcaaggaacgtgcgcag
ccgttgttcatcctggcctcctccctgctggcctacggcatcggtgccggcctgaccgaa
ggcggcggcattctctcgcggccaaaagaacactggttcctgctatggatcccgctggcg
ctgatcgccggcctgagcatcgcccagcgtcgccgcagcctgctgcgcatgccggttcaa
cgcctgaaacctcaagacttcgaacagctgtgcgccaacgcccacgtgattgaagccgat
ggcctggggcccaaggtcctgcgcctggaggatggcagcttcctcaagctgttccgccct
cgtcgctggtacacctccggcagcttcaatccctattcggagcgctttgccagcaacagt
gagcagctgcgcgcattggggattccatcaccggtcatcctcaatctctaccagttaaag
gatgccagcagcgccgtacgttatcagccgctgcccggcctgaccctgcgccaggccctg
caaagcctggacagcagcctgcgggaatcgttgattgagcgtttcggccggttcatggcc
cagcttcacgagcgcggcgtgtacttccgctccctgcatttgggcaacgtgctattgatg
gatgacggcgagtttggcctgattgacgtggccgacatgcgcatctacccatcggccctg
cgtaacgccctgcgccagcgcaacctgcggcatatgcagcgttatccccaagatcgcaac
tggctgttcgaaacccatttcgagcaattggccaagggctatgcctcggttgcttcgcca
agcgccacggcgaagatccgtgaacaggtgctgaagctcaataatccggtcgcgcaggtc
gctagcccggccaagtga
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