Pseudomonas yamanorum: AK972_5445
Help
Entry
AK972_5445 CDS
T05821
Name
(GenBank) putative tonB-dependent receptor yncD precursor
KO
K02014
iron complex outermembrane recepter protein
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_5445
Transporters [BR:
pym02000
]
Other transporters
Pores ion channels [TC:
1
]
AK972_5445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMW86245
LinkDB
All DBs
Position
6042702..6044792
Genome browser
AA seq
696 aa
AA seq
DB search
MKVAAPKRFALLLPGLLGLCNAALADEAPLVLDPSVVTGSRSASPSFDLPYSVDSISREQ
ISDGQLGINASEALSRVPGLVVQNRQNYAQDLQISSRGFGARSAFGVRGIKLIADGIPAS
TPDGQGQAATFNLDTAERIEVLRGPAATLYGSNAGGVIQMFSRNGEGPPRIGAETLVGSD
GLSKNHLTAEGAADGAGFVLDASRMDTDGYRDHSSARRDQTFAKLNFEPDEDSKLALIYS
SLEQNGTQDPLGQAWDAYKADPRSVSSAAELYNTRKSIDHQQVGMNYERYFGEATLQVNA
YTGRRSVIQYLSIPKGTPANERGGGVVQFDRKFYGGSVRWMQPIDSVPGELMIITGLDFD
QSEDSRHGYQNYSGNTLGVKGQLRRDEIDTARSLDPYVQANWAIDRWTLQAGVRHSTMEL
DVDDQFLSNGDSSGNKTYQKNTPSLSVMYAFTPELHGYISAGKGFETPTQAELAYAPGNI
EGFNFGLKPSESTQYEVGLKAQLSDTRINAAVFQITTEDELVVDQSIGGRTSYQNAGRTL
RRGFEVGIERQLSEQWSTNIAYTRLQATYDSDFIGGGKPVDKGNYLPGVPQTTLFAELNW
KPRDWVSTALEGMYRSKVYVEDTNQQHAAPGYSVFNWRARFEQRVEHWTFHQTLRLDNLL
DRQYVGSVIVGDGNGRYYEAAPGRSWYAGAGAEYTF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgcccccaaacgcttcgccctgttgcttcccggccttctgggactgtgt
aacgccgccctggccgacgaggctccgctggtcctcgaccccagcgtggtcaccggctcg
cgtagcgccagcccctcgtttgacctgccttattccgtggacagcatcagccgtgagcaa
atcagcgacggccaactgggcatcaatgcctccgaagccttgtcccgcgtgcctggcctg
gtggttcaaaaccgccagaactacgcccaggacttgcagatttcctcccgtggcttcggt
gcccgctcggcgtttggggtgcgcggtatcaagctgatcgccgacggcatccctgccagc
accccggacggccagggccaggccgccacgttcaacctcgacaccgccgagcgcatcgaa
gtcctgcgcggcccggccgctacgctctatggcagcaatgcgggcggcgtaatccagatg
ttttcccgcaacggcgaaggcccaccgcgcatcggcgccgagacgctggtgggcagtgac
ggcctgagcaagaaccatctgaccgccgaaggcgcggcagacggcgcaggttttgtgctg
gacgcctcgcgcatggacaccgatggctatcgcgaccacagcagcgcccgtcgcgaccag
acctttgccaagctcaatttcgagccggatgaagacagcaaactggcactgatctatagc
agcctggagcaaaacggcacccaggatccgcttgggcaggcgtgggatgcatacaaggct
gacccgcgctcggtcagcagcgccgccgagctgtacaacacccgcaagagcattgaccac
cagcaagtggggatgaattacgagcggtactttggtgaggcaacgctgcaggtgaatgcc
tataccgggcggcggagtgtgattcagtatttgtcgattcccaagggaacgcccgccaac
gaacgcggcggcggcgtggtgcagttcgaccgcaagttctacggcggctccgtgcgctgg
atgcagccaatcgacagcgtgcctggcgagctgatgatcatcaccggcctggatttcgac
cagagcgaagacagccgccacggctaccagaactacagcggcaacacccttggcgtaaaa
ggccagctacgccgggatgaaatcgacaccgcccgcagcctcgacccctacgtccaggcc
aactgggccatcgaccgctggaccctgcaagccggggtgcgccacagcaccatggaactg
gacgtcgacgaccagttcctgagcaacggcgactccagcggcaacaagacctaccagaag
aacacgccgtccttgagcgtgatgtacgccttcacgcccgaactgcacggctacatcagt
gccggcaagggtttcgagacgccgactcaggcggaactggcctatgcgccaggcaatatc
gaagggttcaacttcggcctgaagccgtccgaaagcacgcaatatgaagtgggcttgaag
gcacagctgagcgacacccggatcaacgccgctgtcttccagatcaccaccgaggacgag
ttggtggtggatcaatcgatcggcggccgcaccagctaccagaacgccggccgcaccctg
cgccgcggcttcgaagtgggcatcgaacgccagctcagcgaacagtggagcaccaacatc
gcctacacccgcctgcaagccacctacgacagcgacttcatcggcggcggcaaaccggtg
gacaaaggcaactacctccccggcgtcccgcaaaccacgctattcgccgaactgaactgg
aaaccccgggactgggtcagcaccgccctggaaggcatgtaccgcagcaaggtctacgtc
gaagacaccaaccagcaacacgcggcaccgggctacagcgtattcaactggcgggcgcgg
tttgagcagagggtggagcattggacgtttcaccaaaccctgcgcctggataacctgctg
gatcgccagtacgtagggtcggtgattgtcggagacggcaatggccgctattacgaagca
gcgccgggacgctcgtggtacgccggcgcaggcgccgagtacaccttttag
DBGET
integrated database retrieval system
