Pseudomonas yamanorum: AK972_5515
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Entry
AK972_5515 CDS
T05821
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AK972_5515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_5515
Enzymes [BR:
pym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AK972_5515
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AK972_5515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
Zn_ribbon_6
HypA
iSirtuin
TrwB_AAD_bind
PIF1
AAA_22
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMW86315
LinkDB
All DBs
Position
6127823..6130042
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRSQLQPGMRVRVPFGRREMIGILVEVADHSEVP
AEKLKPAVAILDATPPLPPALFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAEARQER
FWSMVPGARMDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLVQ
VEIRKHAPGERHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECNRCDARMTVHQRSGELRCHHCGHVERVPRHC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRSAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLGGLGLTGIELLGPVPAPMERRAGRYRAQLLLQASARAPLHRLLSSWLLALEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctcgccctgccctcgcccttgcgccgcctgttcgattat
cgggcccctgccggcgtattgcggtcgcagttgcagccaggcatgcgtgtgcgcgtgccg
tttggccggagggaaatgatcggcatcctggtagaagtcgccgatcacagcgaagtgccc
gccgagaagctcaagcctgccgtggccatcctcgacgccaccccgccgcttccacctgcg
ctgttcaagttgtgcctgtggacctcgcagtattaccagcacagcctcggcgataccttg
agctgggcgctgccggtgctgttgcgccagggcgaattggccgaggcgcgccaagagcgt
ttctggtcgatggtaccgggggcgcgcatggacgacccgcgcatcgcccgcgccccgcgc
cagcgtgaagccctggcgaccctggcccagcatccccacggcgtcgcccatcagctgtta
agcaagttgatgctgagcaaggacagcctggacttgctgctcgccaagggtttggtgcag
gtggagatccgcaagcacgcccccggcgaacgccacgaacactggctggcccagccggag
ctgccgctcaatccggaacaacgcgccgcctatgaagcgattcgcgccggcttcgacagc
ttccacgcgttcctgctggcgggcgtcaccggcagcggcaagaccgaagtctatttacag
ctgatccgcgaaaccctcgaggccggcaaacaggcgttggtgttgatccccgagatcaac
ctcggcccgcaaaccctggcgcgtttcgagcagcgcttcaacgcgcgcatcgccctggtg
cactcggcggtcaacgaccgcgagcgcctggaatcctggcttgccgcccgggacggtgag
gccgacattattattggtacccgctcggcgctgttcaccccgatgaaaaatcccgggttg
atcatcatcgacgaagaacacgacggctcttataaacagcaggaaggcctgcgctaccac
gcccgcgacctggcgctggtgcgcgcccgccaggaaaacatcccgatcgtgctgggttcg
gccacgccctccctcgaaagcctgcacaacgcctacaccggtcgctacggcctgctgcgt
ctcaacgagcgggccggcggcgccaagcagccacgcttcctgcgcctggacgtgaaaagt
cgcccgctggacagcggcatttccgggccgatgcaacaagccatcggccagaccctcgcg
gcgggccagcaagtgctggtgttcctcaaccgccggggttttgcgccgacgctgctgtgc
catgactgcggctggatgtccgagtgcaatcgctgcgatgcgcgaatgaccgtacaccag
cgctccggcgagttgcgctgtcatcactgcggccatgtggaacgggtgccgcgtcactgc
ccgcagtgcggcaaggtcgacttgcgaccggtcggcgcaggcaccgagcgcgccgaggag
cggctgggcattctgttcccggattacccggtgctacgggtcgaccgtgacagcacgtcg
cgcaaggacgcgatgaatcagctgttcgccacgatccagaagggccagccgtgcattttg
gtgggcacgcagatgctcgccaaagggcatcacttcccgcgggtgaccctggtgtcgatc
ctggatgccgacggcgggctgttctccggggattttcgcgccagcgaacgcatggcacag
ctgatcgtgcaggtcgcaggccgtgccggtcgggctgaagagccaggcaaggtgatcatc
cagacgcatctggccgaccacccattgctgattcaactgacagagcaaggttactttgcc
ttcgccgagcaggccttgagcgaacgccgctcggccggcttgccgccgtttgcgcatctg
gcgctgctgcgggccgaggcgcacaagccggggcaggccgaaggcttcctggatgaagcg
tgcagcgaggctgaacgtttgcttgggggactgggtctgaccggcatcgaactgctcggc
ccggtacccgcgcccatggaacgtcgcgccgggcgttaccgtgcccagctgctcttgcaa
gccagtgcccgcgccccgctgcatcgtttattaagcagttggttacttgccctggagcaa
atgcccagcgggcgacaagtgagatggtcgttggacgtagacccggtagatttgtattaa
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