Pseudomonas yamanorum: AK972_5690
Help
Entry
AK972_5690 CDS
T05821
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
AK972_5690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AMW86490
LinkDB
All DBs
Position
6306284..6308608
Genome browser
AA seq
774 aa
AA seq
DB search
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLAPETEAARFVDAEKGVADVKAALEGAKYILMERFAEDANLLEKLRN
YLKQEATLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLSEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAISVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTIAILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPGMQMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNKVGVDVNTASVALLARISGLNATLAQNIVTHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDP
KKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQSQGTAPRKETAAPAPANNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccacagtgcccttcatcgcccgttaccgtaaa
gaagtcaccggcagcctcgatgatatccagttgcggcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtatcagcatcctcgccagcatcgaagagcaaggcaag
ctgaccccgcaactggaacgcgacatcaagctcgccgacaccaagacccgcctcgaagac
ttgtacctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgacggtctgttcaacgacccgtccctggccccggaaaccgaagct
gcacgttttgtcgatgccgaaaaaggcgtggccgacgtcaaggccgccctcgaaggcgcc
aagtacatcctcatggagcgcttcgcggaagacgccaacctgctggaaaaactgcgcaat
tacctgaagcaggaagccaccctcagtgcccgcgtgatcgccggcaaggaagaggaaggc
gccaagttccgcgattacttcgaacacgacgagccgctgaaaagcatgccgtcccaccgc
gccctcgcgattttccgcggtcgcaacgaaggcatcctgagctccgcgctgaaagtcggc
gacgagctgccgggtaccatgcacccctgcgaaggcatgatcggtcaacaattcggcatc
cagaatcagaatcgtcctgcggacaaatggctcagtgaagtcgtgcgctggacctggaag
gtcaagctctatacccacctggaaaccgacctgctgggcgagttgcgcgacggcgccgag
accgaagccatcagcgtgttcgcccacaacctgcacgacctgctgctggccgcgccagcc
ggcccacgcgcgaccctgggcctcgacccgggcctgcgcaccggctgcaaggttgccgtg
gtcgacgccaccggcaagctgctcgaccatgccacggtttacccccacgtgccgcacaac
aagtgggaccagaccatcgcgatcctggccgccttgtgcgccaagcactcggtggacctg
atcgccatcggtaacggcaccgccagccgtgaaaccgacaagctggccgccgagctgatc
aaaaaatacccgggcatgcagatgaccaaggtgatggtctccgaggccggcgcttcggtg
tactccgcgtctgaactggcttccaaggaattcccggacctcgacgtgtcgatccgtggc
gccgtgtccatcgctcgccgcctgcaggatccattggccgaactggtgaagatcgatccg
aaatccatcggcgtcggccagtaccagcacgacgtatcgcagctgaaactggcacgcggt
ctggatgcagtagtggaagactgcgtgaacaaggtcggtgtggatgtgaacaccgcctcg
gtagcgctgttggcccgaatttccggccttaacgccaccctggcacagaacatcgtgacc
caccgcgacgaaaacggtgcgttcaagacccgtgcagcgctgaaaaaagtcgcacgcctt
ggcgaaaaaaccttcgaacaagccgccggcttcctgcgcgtcatgaacggcgacaacccg
ctggactcctcggccgtccacccggaagcctacccgctggtacaacgcatcgccgctgaa
accgaccgtgacatccgctcgctgatcggcgacgccgcgttcctcaagcgcctggacccg
aaaaagtacaccgacgaaaccttcggcgtgccgaccatcaccgacatcctgcaagagctg
gaaaaaccgggccgcgacccgcgtcccgagttcaagacagccgagttccaggacggcgtc
gaagacctcaaggacctgcaactggggatgatcctcgaaggtgtggtgaccaacgtgacc
aactttggcgcgtttgtggatatcggcgtgcatcaggacggtttggtgcacatctccgcg
ctttcggagaagttcatcaaggacccgcgcgaagcggtaaaagccggtgacgtggtcaag
gtcaaggtcatggaagtcgacatcccgcgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacaccgggcgagaaaatcgacggtgcccgcggcgcacgcccaggctcggcgccacgc
cagtcccaaggcactgcgccccgcaaggaaaccgccgcgccagccccggccaataacgcc
atggcttcgctgttcgccaacgccaaacaactgaagaaacgttaa
DBGET
integrated database retrieval system
