Pseudomonas yamanorum: AK972_5776
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Entry
AK972_5776 CDS
T05821
Name
(GenBank) Biofilm PGA outer membrane secretin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
pym
Pseudomonas yamanorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_2
TPR_14
TPR_11
TPR_1
TPR_16
TPR_7
TPR_9
TPR_17
TPR_15
TPR_8
TPR_12
TPR_20
TPR_10
TPR_6
TPR_5
Motif
Other DBs
NCBI-ProteinID:
AMW86576
LinkDB
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Position
complement(6412780..6415233)
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AA seq
817 aa
AA seq
DB search
MSRNVHPFIRLALCSQLLWPVVASADAAYDSLINQARSGNYGPALNLLRQLPAERQTPGQ
VSDHLLIASWARQDTEVLTVYEAQGRSRTLTTQALVTVARTYRNQQRWEPAIAVYRQALQ
REPNNPDLQLGLALTQADAGQTAEAVQRTRALVAAKPDDADRRMALGYALTRAGSTYDAL
FEFDQAFIRAGNKPEVAREYIIALQRARLPEPALRLAARRPGLLDPVTQRRLEGDLAAER
VRLAEFASRSEKERYVIADRALKDYDQLLTTWTPDATAHDDVVRWRIDRLGALKARARTA
EVIRDYEVLKGEGVQLPTYALRWVAAAYLDQHQPEKAAPLYRQALAASDADAGDHVEDST
ALFYALLENDQVVEAREVADNLASTQKPRVELKGLPIGNPNDAWMDAQQLAAQAGTYGAD
LPASEKGLEALVQQAPGNIGLRLAQADMYRARDWPRRAENTLKETEAQAPRDIGLEVSQG
HTALDLQEWRQLDALTDDVVDRAPDNRQVQRLSRLRDVHDMAELRVEAYTGKSNGGGDNG
AGAVSGSRDFGIETLLYSPPIDEDWRVFGGVGYATADFQEGTGQHRWQRLGVERRTRDVT
LEAEVSNHSYGFGDKQGARIAIARDINDQWQYGGSLDYLSASTPLRALNADITANSGSGF
IRWRANESREWKLALSPSHFSDGNNRLEALLTGRQGVYSSPGVQVDLGLEVGTSRNTKED
TPYFNPRSDFSVLPTATVNHVLYHRYETQWSQQFQVGAGTYSQRDYGTGGVALVGYGQRF
RWNDVLETGANLSWISRPYDGERESDLRLIVDLTYRF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtaatgttcatccctttatccgtctggccctgtgtagccagttgctctggcct
gtcgtggcgtcggcggatgctgcctatgattcgctgatcaaccaggcccgcagcggcaac
tatggcccggccctcaacctgttgcgccaattgcccgccgagcgccagacgcccgggcag
gtcagtgatcacctgttgattgccagttgggcacgccaggacaccgaggtgctgacggtc
tacgaggctcagggccgcagtcgcaccctaactacccaagcgttggtcaccgtcgcccgt
acctatcgcaaccagcagcgttgggagccggcgattgccgtgtatcgccaggcgctgcaa
cgcgagccgaataacccggaccttcaattgggcctggccctgacccaggccgacgccggc
caaaccgccgaggccgtacagcgcacccgagctctggtggccgccaagcccgacgacgcc
gaccgccgcatggccttgggttatgccctgacccgtgccggttcaacctatgatgcgctg
ttcgaattcgaccaggcgttcatccgcgccggcaacaaacccgaagtcgcccgcgaatac
atcatcgccctgcaacgcgcgcgcctgccggaaccggccctgcgcctggccgcccggcgc
ccgggcctgttggacccggtcacccagcgccgcctcgaaggcgacctggccgccgagcgc
gtgcgcctggccgagttcgcctcgcgcagtgaaaaagagcgctacgtcatcgccgaccgc
gccctcaaggattacgaccaactgctcactacctggacaccggatgccaccgcccatgat
gacgtggtgcgctggcgcatcgatcgcctgggtgctctgaaggctcgggcgcgcaccgcc
gaggtgatccgcgattacgaagtgctgaagggcgaaggtgtgcagctgccgacctacgcg
ctgcgctgggtcgctgccgcttaccttgaccagcaccagccggaaaaggccgcgccgctg
tatcgccaggccttggcggcgagcgatgcggacgccggcgatcacgtcgaagacagcacc
gcgttgttctacgccttgcttgaaaacgatcaagtcgtggaggctcgcgaagtcgccgac
aacctggcgagcacccagaaaccccgggtcgaactcaagggcctgcccatcggcaacccc
aacgacgcctggatggacgcccaacaattggccgcccaggccggcacctatggcgccgac
ctgcccgccagcgaaaaaggcctggaagccctggtgcagcaggcgcccggcaatatcggc
ctacgcctggcccaggccgatatgtaccgcgcccgcgactggccacggcgcgccgaaaac
accctcaaggaaaccgaagcccaggccccgcgcgacatcggcctggaagtctcccaaggc
cataccgccctggatctgcaggagtggcgccagctcgatgcgctcaccgacgacgtggtc
gaccgcgccccggacaaccgccaggtacagcgcctcagccgcctgcgggatgtgcatgac
atggccgaattgcgcgtcgaggcctacaccggcaaaagcaacggtggcggcgataacggt
gcgggcgcggtgtccggcagccgcgatttcggcatcgaaaccttgctctacagcccgccc
atcgatgaagactggcgcgtgttcggcggtgtcggctacgccactgccgatttccaggaa
ggcaccggccaacaccgctggcagcgcctcggtgtcgagcggcgcacccgcgacgtgacc
ctcgaagccgaggtctccaatcactcctacggctttggcgacaagcagggcgcgcgcatc
gcgattgcccgggacatcaatgaccaatggcagtacggcggtagcctcgactacctctcc
gccagcaccccgctgcgggcgctgaatgccgacattactgccaacagcggcagcggtttt
atccgctggcgcgccaacgaaagccgcgaatggaaactggccctgagcccgtcccatttc
agcgacggcaacaaccgtctcgaagcactgctcaccggtcgccagggcgtgtacagctcg
ccgggggtgcaagtcgatctgggcctggaagtcggcaccagccgcaacaccaaggaagac
acgccgtacttcaacccgcgctcggacttcagcgtgctgcccacggcgaccgtcaaccac
gtgctctaccaccgctacgaaacccagtggagccagcagttccaggtgggggcgggcacc
tacagccagcgcgattacggcaccggcggcgttgcattggtgggctacggccagcggttt
cgctggaacgacgtgctcgaaaccggcgccaacctcagctggatcagccgaccttatgac
ggtgagcgcgaaagcgatctgcgcctgatcgtcgacctcacctaccgcttctag
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