Pseudomonas yamanorum: AK972_5910
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Entry
AK972_5910 CDS
T05821
Name
(GenBank) TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pym03009
]
AK972_5910
03016 Transfer RNA biogenesis [BR:
pym03016
]
AK972_5910
Enzymes [BR:
pym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
AK972_5910
Ribosome biogenesis [BR:
pym03009
]
Prokaryotic type
Other maturation factors
AK972_5910
Transfer RNA biogenesis [BR:
pym03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AK972_5910
Prokaryotic type
AK972_5910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
AMW86710
LinkDB
All DBs
Position
complement(6579588..6580127)
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AA seq
179 aa
AA seq
DB search
MREAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKGRSVDKGLILIADNIRQFD
FLFEDFPDEWMDRMASTWPGPNTWLVPHQNLLPEWITGVHDTVALRVTDHPQVRDLCSLV
GPLISTSANPQGRPAARTRIRVEQYFRGQVDLVLGGNLGGRKNPSLIRDLATGEVVRPS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagaagccgcacgagaaattcgcgcaggcgcggtgattgcctatccaaccgaggcg
gtctggggcctgggctgtgacccttggaacgaagaggccgtggatcggttgctggcgatc
aagggccggtctgtggataaggggctgatcctgattgccgacaatatccgtcagttcgat
tttctcttcgaagactttcctgatgagtggatggaccgcatggccagtacctggcctggc
ccgaatacgtggctggtgccccatcagaacttgttgcccgagtggattaccggggtgcat
gacacagtggcgttgcgggtgactgatcatccgcaagtgcgggatctgtgctcgctggtc
gggccattgatttccacctcggccaacccacagggccgcccggcggcgcgcacgcggatt
cgtgtggagcagtacttccgcgggcaggtggatctggtgttgggcgggaatctggggggg
cggaagaatccgagtctgattcgggatctggcaacgggtgaggttgtgcgcccttcctga
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integrated database retrieval system
