Pseudomonas yamanorum: AK972_5931
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Entry
AK972_5931 CDS
T05821
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pym
Pseudomonas yamanorum
Pathway
pym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AK972_5931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_5931
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AK972_5931
SSDB
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Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_16
AAA_29
AAA_27
AAA_13
ABC_tran
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
AMW86731
LinkDB
All DBs
Position
complement(6601386..6602489)
Genome browser
AA seq
367 aa
AA seq
DB search
MSLSRVSVTAVRNLHPVTFSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSARLLPV
IQYEQLACTVFGQVELAEGGHSSLGISRDRQGEFQIRIDGQNARSAAQLAEILPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALRQRNSWLRHGTLDAASQAAWD
RELCLASAEIDEYRRAYIKALKPVFEQTLSELLELEGLTLSYYRGWDKDRELSAVLATSL
QRDQQIGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVNQARRGQCI
YLVDDLPSELDEQHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcagtcgcgtctcggtcaccgcggtgcgcaatttgcacccggtgaccttctcc
ccttccccccgcatcaatatcctccacggcgccaacggcagtggcaaaaccagcgtgctg
gaagccattcacctgctagggctagcccgttcctttcgcagtgcccgcttgttaccggtg
attcagtacgagcaattggcgtgcacggtatttggccaagtcgaattggcggaaggcggt
catagcagcttggggatttctcgtgatcgtcagggggagtttcaaatacgcatcgacggg
cagaatgctcgcagtgccgcgcagctggcggaaatcctgccactgcaactgatcaaccca
gacagcttccgcttgctggaaggcgcgccaaaaatccgcaggcaattcctcgattgggga
gtgttccacgtggaaccgcgtttcatggccacttggcagcgcctgcagaaggccctgcgg
cagcggaactcatggctgcggcatggtacacttgacgccgcttcgcaagcggcctgggac
cgggaactgtgcctggccagcgctgaaatagatgaataccgccgcgcctatatcaaagcc
ttgaaaccagtctttgaacagaccttgagcgagttgcttgaactcgaggggctgacgttg
agctactaccgtggttgggacaaagaccgggaactgagtgcagtgctcgccacgtcctta
caacgggatcagcaaattggtcacacccaggccggaccacaacgggctgatttgcgcctt
agattaggcgcacataatgctgcggacatcttgtcccgcggtcagcagaagttggtggtt
tgcgccctgcgtatcgcccaggggcatctggttaaccaggcccggcgcgggcaatgtatt
tatctggtggatgacttgccgtccgaactggacgagcagcaccgccgcgcgttatgccgc
ttgttggaagacttacgctgccaggtgtttatcacctgtgtagaccacgaattattgagg
gaaggctggcagacggaaacgccagtcgctttgttccacgtggaacaaggccgtatcacc
cagacccacgaccatcgggagtga
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