Pseudomonas yamanorum: AK972_6049 Help Entry AK972_6049        CDS       T05821                                  Name (GenBank) ClpB protein   KO K11907   type VI secretion system protein VasG Organism pym  Pseudomonas yamanorum Pathway pym02025   Biofilm formation - Pseudomonas aeruginosa pym03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pym00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     AK972_6049  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     AK972_6049  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pym02044]     AK972_6049 Secretion system [BR:pym02044]  Type VI secretion system   Imp/Vas secretion system core components    AK972_6049 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Zeta_toxin AAA_25 Sigma54_activat TniB nSTAND3 AAA_7 ATPase_2 NACHT AAA_14 Clp_N AAA_18 Torsin Hpr_kinase_C SRP54 CbiA NBD_SMAX1 Motif Other DBs NCBI-ProteinID:  AMW86849 LinkDB All DBs Position complement(6743967..6746639) Genome browser AA seq 890 aa AA seqDB search MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG ILKTPSLRHALLGLSGEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNSEAL LSAERERLATLETRWAEEKTLVDELLATRATLREKAGVVDSDAGNHESDELRAKLVDLQQ RLSTLQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS EFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD KGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPP ALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVENTHKVAFDYDDEVVDLIVSRCTETE SGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISTRDNELHYDFND NT seq 2673 nt NT seq  +upstreamnt  +downstreamnt atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaggcc atcgaagccgccaccgtgttctgcaagctgcggggcaacccgtatgtggaactggcccac tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcatccggcagttc aacgtcgagcccgcgcgcttggcccgtgacttgactgaagccctggaccgcctgccccgt ggctcgacgtcgatcaccgacctgtcatcccatgtggaggaagcggtcgagcgtggctgg gtctatggcagcctgatgttcggcgaaagccaggtgcgcaccggttacctggtgctgggg attctcaagacgccaagcctgcgccatgcgctgttggggttgtccggtgaattcgacaag atcaaggccgaagccctgagcgaacgctttgacgaatacgtcggcgactcgcccgaaaat gcactgagtgccagcgacggtttcaacgccggtgctgtcccgggcgaggccagcggcgcc atggccccgagtgcgatgggcaagcaggaagccctcaagcgcttcaccgtcgacctgacc gaacaggcccgcagcggcaagctcgacccgatcgtcgggcgtgacgaagagatccgccaa ctggtggacatcctcatgcgtcgccgccagaacaacccgatccttaccggtgaagccggt gtcggcaagaccgccgtggttgaaggtttcgccctgcgcatcgtcgccggcgacgtgccg ccagcgctgaaagatgtggaactgcgcagcctcgatgtcggcctgctgcaagccggcgcc agcatgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg ccgaaaccgatcatcctgtttatcgacgaagcccacaccctggtaggtgccggtggcgcc gccgggaccggtgacgcggccaacctgcttaaacccgcactcgcccgtggcaccttgcgt accgtggccgccaccacctgggccgagtacaagaagcacatcgaaaaggacccggccctg acccgccgtttccaggtggtgcaagtggccgagccgtcggaagacaaggcgttgctgatg atgcgcggcgtggcctcgaccatggaaaagcaccatcaggtgcagatcctcgatgaagcc ctggaggcttcggtgaagctgtcccaccgctatattccggcgcgtcaattgccggacaaa tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtgccg gcggaagtcgacgacagccgccgtcgaatcgaggcgctggaaaccgagctgcaaatcatc gcccgcgagcatgcgatcggcatcgccatcggtgcgcgccagaccaacagcgaagcgctg ctgagcgccgaacgcgagcgcctggccaccctggaaacccgttgggccgaagagaaaacc ctggtggatgaattgctcgccacccgtgcaaccctgcgcgaaaaagccggtgtggtggac agtgatgcgggtaaccacgagagcgacgaactgcgtgcaaaactggtcgacctgcaacag cgcctctccacactgcaaggcgaaaccccgctgatcctgccgaccgtggattaccaagcg gtggcctcggtggtcgccgactggaccggcatcccagtgggccgcatggcccgcaacgaa ctggaaacggtgctcaacctcgaccagcacctgaagaaacgcatcatcggccaggaccac gccttgcagatgatcgccaagcgcatccagacctcccgcgccggcctcgacaacccgagc aagccgattggcgtgttcatgcttgctggcacctccggcgtgggcaagaccgaaaccgcc ctggccctggccgaggccatgtacggcggtgagcagaacgtcattaccatcaacatgagc gagttccaggaagcccacaccgtgtccaccctcaagggcgcgccaccgggctacatcggc tacggcgaaggcggcgtactgaccgaagccgtgcggcgcaaaccctacagcgtggtgctg ctggacgaggtggaaaaagcccacccggacgtgcatgaaatcttcttccaggtgttcgac aaaggcgtgatggaagacggcgaaggccgggtgatcgacttcaagaacaccttgatcctg ctgaccaccaacgccggcaccgagctgatttcccaggtctgcaaagacccggcgaacatc cccgagcccgaggaaatcgccaaggccctgcgccagccgttgctggagattttcccgccg gcgctgctcggccgcctggtgaccattccgtactacccgctgagcgacgagatgctcaag gcgatcacccgcctgcaactcaaccgcatcaaaaagcgcgtggagaacacccacaaagtc gccttcgattacgacgacgaagtcgtcgacctgatcgtatcccgttgcaccgaaaccgaa agcggcgggcggatgatcgacaccatcctcaccaacagcctgctgccggacatgagccgc gagttcctcacccgcatgctcgaaggcaaggcgctggcgggcgtgcggatcagcacgcgg gataacgaattgcactacgacttcaacgattga

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