Pseudomonas yamanorum: AK972_6061 Help Entry AK972_6061        CDS       T05821                                  Name (GenBank) IcmF-related protein   KO K11891   type VI secretion system protein ImpL Organism pym  Pseudomonas yamanorum Pathway pym02025   Biofilm formation - Pseudomonas aeruginosa pym03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pym00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     AK972_6061  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     AK972_6061  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pym02044]     AK972_6061 Secretion system [BR:pym02044]  Type VI secretion system   Imp/Vas secretion system core components    AK972_6061 SSDB OrthologParalogGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical T7_gp14 nSTAND_NTPase5 DUF6023 PilO_N Motif Other DBs NCBI-ProteinID:  AMW86861 LinkDB All DBs Position 6758765..6762265 Genome browser AA seq 1166 aa AA seqDB search MKAFFSFVIRWVIPLLGLIALSLIIWFVGPLLDVLVPEGRRWALIILVFAVWIAYRVFRI IQARRQAAEVMRSLAAETPPDPASVATAEELATLRQRMDEALALLKKAKLGGDERRNLYE LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG RYTTQDSNSTVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKNSDSP LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQGFLEGVFKPN AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV AFAERGLVGVNPKVERRRKWIARGVLAATVALVLVVSTLWWVSYRANQAYIAQVDQKVAP LGQTVQNLSPAQREVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRTLPRD LPADQRQALIGHLQALFERHPPSARLDPRLIDDLRRQLQQLPVAQRVYDRIKRQKLPEGV PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQGFLLTSLNQTGTLAEEQWVL GREPADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP LKKLLVAVSKETDLQAEERLLAAKGAPVEGGVDKLKERLGGLLGQDQPTANAPAASEDPV TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTQTWRWQPGAAQKLGIAPGVLQTFQ RAATIRDAFFRAGGTQPIVRFELKPVAMDATITQFLLDLDGQQLSYDHGPSRPVAMQWPN PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASIS YELRANSAFNPFKSRVLNGFSLPERL NT seq 3501 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcgtttttcagttttgtgattcgctgggtgatcccgttgctgggcctgatcgcc ttgagcctgatcatctggttcgtggggccgttgctcgatgtgctggtgccggaaggacgc cgctgggcgctgatcatcctggtgttcgcggtgtggattgcctaccgcgtgttccggatt atccaggcccgtcgccaggccgccgaagtgatgcgcagcctcgccgcggaaaccccgcca gacccggccagcgtcgccaccgccgaagagctggcgaccctgcgccagcgcatggacgaa gccctggccctgttgaaaaaggccaagctgggcggtgacgagcgccgcaacctgtatgag ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaat tccgggctgcactttcccttggccgcgcagttgggtgccggtgctgtacggggcgtgggc ggtacgcgcaattgcgattggtggtttaccgaccaagccgtattgctcgacaccgccggc cgctacaccacccaggacagcaactccacggtggataaagccgcttggctgggcttcctc gacctgctgaaaaagcagcgttcccggcgcccgattgatggtgcgtttatcgccatcagc ctctcggacctgctgctgggcagcgacgccgagcgtgccgcccatgccgccgcgatccgc ctgcgtatccaggagctgtacacccaactgggcgtgcgcttcccgatctatctgatgctg accaagctcgacctggtgccgggcttcatggagttcttcgacaacctgagcaaggaagaa cgcgcccaggtgtggggcatgaccttcgccctggacgacggcaagaacagcgacagcccg ctggcccatttacaaagcgaattcgccggcctggaacagcggctcaacgagcgcctggtg gaacgcctgcaacaggaacgcgacccggcgcggcgcgacctgatctacggcttcccgcag cagttcggcgcgttgaaggattgcctgcaaggcttcctcgaaggcgtgttcaaacccaac gcctttgaagagcgggttttgctgcgcggcgtgtacttcaccagcggcacccaggagggc agcccgattgaccgcttgatcggcgccatggcccagagcatgaacctggaccgccagcac ctggcgcgtcagaccggcaccgggcgtagctacttcatcgaaaaactgttcaccgccgtg gcgtttgccgagcgtggcctggtgggcgtcaatccgaaggtcgagcgccgtcgcaagtgg attgcccgtggcgtgttggccgcaaccgtggcgttggtgctggtggtcagtacgctgtgg tgggtgagttatcgcgccaaccaggcctacatcgcccaggttgaccagaaggtcgcaccg ctgggccagaccgtgcagaacctgagcccggcgcaacgcgaagtgctcgcggtattgccg ttgctcaacgccgtgaagaacctggcgggcgactcgccgagctggtccgaaggcttgggc ctgtatcagggcgacatgctcgaagccgaatccgccagcgtctaccgcaagctgttgatc gccgtgttcgcgccccgtttggtgacgcgcatcgaagagcaactgcacggcggcggcaat tccgacttcctctacgaaggcttgaaggcctacctgatgctcgccgacagcgagcattac gacccggacttcatcaaggcctggatcgccctggactgggatcgcaccctgccacgggac ctgccggcggatcagcgccaggcattgatcggacacttgcaggccttgttcgagcggcac ccacccagcgcccggctggacccgcgcttgattgacgatctgcgccggcaactgcagcaa ctgccggtggcccagcgcgtctacgaccggatcaagcgccagaaactgccggaaggcgtg ccggactttcgcatcaacgaagcggcgggccgtgatgccgcgctggtgttcagtcgcaaa agtggcaagccgttgggtgagccgttgagcggcttcttcaccgccaagggttatcgccag ggcttcctgctgaccagcctgaaccagaccggcaccctcgctgaagagcaatgggtgctg ggccgcgagccggcggatcaacagaacgtggtcagcctcgcagccgacgtgcgccgcctg tacttccaggactatcaacgccagtgggacgccttgctggctgacatcgactttgtgccg attaccagcgtggcccaggcggccgacgttttgcgggtgatttccgggccgacctcgccg ctgaagaagctgctggtggcggtctccaaggagacagacctgcaggcggaagaacgcctg ctggccgccaagggcgcaccggtggaaggtggcgtggacaagctcaaggaacgcctcggc ggcttgctcggccaggaccaaccaactgcaaatgcaccagcggccagtgaagatccggtg acggcgcacttcgccgaactcaatagcatcgtcagcaagaacgaaggcgaaccagcggcc attgatggcctgctggcggacatgaatgcgctgtatgtgcaggtcagcgccatggtcggc gccagtggcgatgcattactcggcgaagcgaaaaaccaggcggcggctgcggccacgcgg gtcagcttgaatgccgaacgccagccgccgctggtgcagggcatggtcaagtcggtggtc aactccaccaccaacagcatgatgggcggggtgcgtaaccagctgaatgcggcgtgggtc agcgaagtggtgaacgtgtaccgccagtccctggctgggcgctatccgatgtcgcccggc agtgcgcgggacgcgactctggatgatttcgggcagttctttggggtgggcggggtgatg gacaattacttccgcaagtacctgcaaccttacgtcgacacctccacccaaacctggcgc tggcagccgggcgcggcgcagaaactcggcatcgcgccgggcgtgctgcaaaccttccag cgggcggcgaccattcgtgacgcgtttttccgcgccggtggcacccagccgatcgtgcgc tttgaactcaagccggtggcgatggacgcgaccatcacccagttcctgttggacctggac ggccagcaactgagctacgaccacggcccgagccgcccggttgcgatgcagtggccgaat cccggcagcattggtgtggtgcgcatttccatcatgccgccgtcagccagcggacgctcc ggcgtgacgctggacggcccgtgggcgtggtttcgcctgctggagcaatcggacttgacc gccggtaattcaccggaccgtttcaacctgcgcctgcgggtcgacggcgcgagcatctcc tacgagttgcgggccaacagcgccttcaacccgttcaagagtcgcgtgcttaacggcttt agcctgccggagcgtctatga

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