KEGG   Pseudomonas yamanorum: AK972_6087
Entry
AK972_6087        CDS       T05821                                 
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pym  Pseudomonas yamanorum
Pathway
pym03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AK972_6087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pym03400]
    AK972_6087
Enzymes [BR:pym01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AK972_6087
DNA repair and recombination proteins [BR:pym03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AK972_6087
SSDB
Motif
Pfam: Exo_endo_phos CbiK
Other DBs
NCBI-ProteinID: AMW86887
UniProt: A0A1H2GX55
LinkDB
Position
complement(6788299..6789078)
AA seq 259 aa
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgacccagccttccaactggatggctacttcctttatgcctgtgatgcc
gaagttcccgcccaaggcggcgtggctttgtattcgcggttgcaacccaaggcggtcatc
agcggcctcggcttcgagacagccgaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccatcagggcagaatggcgatgaagacttgaac
cagaagttcaagctaatggacgacttcgcccgttatctggataaacagcggcgcaaacgt
cgcgagtacatttactgtggctcgctgtatgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatcaccgggcttcctcgcgccggaacgggcctggatggacgag
attgtcggcaatatgggctatgtcgatgccctgcgtgaagtcagccgcgaaggcgaccag
tacagctggtggccggataacgaacaggccgagatgctcaatctcggctggcgttttgac
taccagttgctgacgccaggcctgcgccgcttcgtgcgcagtgcacgcctgccacgccag
ccgcgcttctcgcagcacgcgccgctgatcgtggactacgactggaccttgaccatctaa

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