Pyrococcus sp. NA2: PNA2_0124
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Entry
PNA2_0124 CDS
T01487
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pyn
Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyn03016
]
PNA2_0124
Enzymes [BR:
pyn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PNA2_0124
Transfer RNA biogenesis [BR:
pyn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PNA2_0124
Prokaryotic type
PNA2_0124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEC51042
UniProt:
F4HIB5
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All DBs
Position
complement(108031..109245)
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AA seq
404 aa
AA seq
DB search
MLEDLNYLSETPGIGGKIKEKPEDFIVKEVLPKSIFRGNCRIYLLKKRNWETMAAIKEIA
KRLGMHYSEIGFAGTKDRHALTYQYISICKDVEVEDLKIRDIELKFVGYGKRLKLGYLLG
NKFLIRVREAKRPELLPEIIGELKEKGGFPNYFGIQRFGERRSVNHIVGKLLLEGKYEEA
AEVFLGYPGNGMEGDDARKRFMETKDVELALKEFPKFLRYERAMLYKYRETGSWKRAFLV
LPRPILRIFIHAFQAYLFNLYLSRRIEEGLPLDEALPGDIIVQVKRGIPLRNRTYRVTET
NVDFVNEKIREGEAMVSGPIFGYSYRKADGIPGKIEKEILEEHGIEIERFKRLPKPMREP
GGRRELLIKPKRFAYKIEGKDVLFRFFLPKGVYATSVLREIIKP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaagacctcaattatttaagtgaaactcctggaattgggggaaaaattaaggag
aaaccggaggattttatcgttaaggaagttctaccaaaatcgatttttagaggcaattgt
cggatatatctactcaagaagaggaactgggaaacaatggctgcaatcaaagagatagct
aaaaggttaggaatgcactattctgaaataggatttgctggaactaaagatagacatgcc
ttaacttatcagtatataagcatatgcaaggatgttgaagttgaggatttgaagataagg
gacattgagcttaagtttgttggttatgggaagaggttgaagttagggtacctactcggc
aataagttcctcataagggttagggaagccaaaagaccagaacttcttccagaaataata
ggagaattgaaggagaaagggggattcccaaactactttggaattcagagatttggagag
aggagaagtgtgaatcatatagttgggaagttattgcttgaagggaagtatgaagaggct
gcagaggttttcctgggatatcctgggaatggaatggaaggtgatgatgcgagaaaaaga
ttcatggaaaccaaagatgtcgagttggctctgaaggaatttccaaaatttctaagatat
gagagggcaatgctctacaaatatagggagactggaagttggaagagagccttccttgtt
ctaccaaggccaatcctaagaatattcattcacgcctttcaagcttacctctttaacttg
tacctctcgagaagaattgaggagggcctacctttggatgaggcccttccaggagatata
atagttcaagtcaaaaggggaattcccctgagaaatagaacttacagggtgacggagact
aacgttgatttcgtcaatgaaaagataagggaaggagaagccatggtctcgggtccaatc
tttggttacagctatagaaaagccgatggaatcccagggaaaattgagaaggagattctt
gaggagcatggcattgagatagagaggttcaaaaggttgccaaaacccatgagggaacca
ggaggaagaagagagctcttgataaagccaaagagattcgcctataaaattgaggggaag
gacgttctcttcagattctttctcccaaagggggtctatgctacaagtgtccttagggag
atcattaagccttaa
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