KEGG   Pyrococcus sp. NA2: PNA2_0288
Entry
PNA2_0288         CDS       T01487                                 
Name
(GenBank) signal recognition particle protein Srp54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pyn  Pyrococcus sp. NA2
Pathway
pyn02024  Quorum sensing
pyn03060  Protein export
pyn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pyn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PNA2_0288
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PNA2_0288
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PNA2_0288
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pyn02044]
    PNA2_0288
Enzymes [BR:pyn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     PNA2_0288
Secretion system [BR:pyn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PNA2_0288
  Eukaryotic Sec-SRP protein
   PNA2_0288
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA nSTAND3 AAA_22 MobB AAA_16 cobW Glyco_transf_4 AAA_33 MeaB AAA_17 LpxK ATP_bind_1 AAA_30 ResIII NTPase_1 Fe-ADH IMPDH 6PF2K NPHP3_N AAA_18 MMR_HSR1 KTI12 APS_kinase ParA RNase_Zc3h12a AAA_26 GTP_EFTU AAA_31 Thymidylate_kin NACHT YqeC AAA_5 TsaE AAA TrwB_AAD_bind SLFN-g3_helicase AAA_19 Rad17 Glyco_trans_4_2 AAA_7 AAA_28
Other DBs
NCBI-ProteinID: AEC51206
UniProt: F4HJ86
LinkDB
Position
complement(246027..247358)
AA seq 443 aa
MVLDTLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLNLTREIQRRA
LEEKPPAGISRKEHIIKIVYEELTKFLGTEARPIEIREKPTILLMVGVQGSGKTTTVAKL
ARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQEKDAIKLAREGVKHFKE
KGVDLIIVDTAGRHKEEKNLIEEMRQISEAINPHEVILVIDGTIGQQAYNQALAFKEATP
IGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGVGEKIDDIEPFDPARFVSRLLGLGDIQ
GLLEKFKEIEKEIEIKEEDLERFLRGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGYSL
PDELISVGEERLRKFKVIMDSMTEEELMNPEIINYSRIKRIARGSGTSVKDVKELLNQYR
QMKKFFKSMNKRQLSRLARRFGM
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggttctagatacgcttggaaaggcacttagcaatgcccttaagaagatagcaagagcg
ggtagtgttgatgaggccctagttaaggaggtcgttagggatattcagagagctttaatt
caagctgacgttaatgttagacttgttctaaacctaacgagagaaatacagaggagagct
ctcgaggaaaagcctcctgctggaatttcaaggaaggaacacataataaagatagtctac
gaagagctgacgaagttccttgggactgaggccagaccaatagagatcagggaaaagcca
acgatactgctgatggttggagtccagggaagtggaaaaacaaccacagtggcaaagctc
gcaaggtactttcagaagaggggttataaggttggagttgtatgctcggacacctggagg
cctggagcttatcaccagctcaagcaactccttgatccttatcacatagaggtctttggc
gatccccaagagaaggatgcaataaagttagccagagagggagtgaagcacttcaaggag
aagggagttgatctaataatagtggataccgctgggagacacaaggaagaaaagaacctt
atagaggagatgaggcagataagtgaggcgataaatccgcatgaagttatcttggtgata
gatggaaccataggccagcaagcctacaatcaggcattagccttcaaggaggcaaccccg
ataggatcaataatagttacgaagttagacagctcagcaaagggaggaggggctctctcg
gcagttgcagcaactggagctccgattaaattcattggagtgggagagaagatagatgac
atagaaccatttgatccggcaagattcgtttctagattactgggcttaggtgacatccag
ggattattggagaagtttaaagagatagagaaggaaattgaaattaaggaggaagattta
gagaggtttctgaggggaaaattcacactaaaagatatgtatgcccagttagaggcgatg
aggaaaatgggaccactaaagcagatacttaggatgatccctggacttggttattctctt
ccggatgaattgatatccgttggtgaggagaggttgagaaaatttaaggtgataatggat
tcgatgacagaagaagagcttatgaaccctgaaataataaattactcgaggataaagaga
atagcaaggggatcaggcacttcagttaaggatgttaaggagttgctgaatcaatataga
cagatgaaaaagttcttcaagagcatgaataagagacaactttcaagactagcaaggagg
tttggaatgtga

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