Pyrococcus sp. NA2: PNA2_0438
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Entry
PNA2_0438 CDS
T01487
Name
(GenBank) cell division protein CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pyn
Pyrococcus sp. NA2
Pathway
pyn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PNA2_0438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyn03019
]
PNA2_0438
03009 Ribosome biogenesis [BR:
pyn03009
]
PNA2_0438
04131 Membrane trafficking [BR:
pyn04131
]
PNA2_0438
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pyn04147
]
PNA2_0438
Messenger RNA biogenesis [BR:
pyn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PNA2_0438
Ribosome biogenesis [BR:
pyn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PNA2_0438
Membrane trafficking [BR:
pyn04131
]
SNARE
SNARE associated proteins
Others
PNA2_0438
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PNA2_0438
Exosome [BR:
pyn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PNA2_0438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_2
AAA_22
AAA_5
AAA_14
TIP49
AAA_33
Vps4_C
nSTAND3
AAA_28
RNA_helicase
IstB_IS21
AAA_18
AAA_24
Mg_chelatase
Sigma54_activat
NPHP3_N
DUF815
Parvo_NS1
AAA_7
ABC_tran
AAA_25
Bac_DnaA
ATPase_2
AAA_17
NB-ARC
TsaE
PhoH
Zeta_toxin
SLFN-g3_helicase
AAA_3
AAA_lid_PRS2_C
ATPase
Zot
RASSF8-10_RA
DUF3450
ARMT1-like_dom
Motif
Other DBs
NCBI-ProteinID:
AEC51355
UniProt:
F4HK43
LinkDB
All DBs
Position
complement(368143..370530)
Genome browser
AA seq
795 aa
AA seq
DB search
MAEKKEVKLKVASAYQRDVGRGIVRLDRKTMRELGISPGDVVEIIGTKNTAAIAWPAYPE
DEGLGIIRMDGTIRKNAGVGLGDEVTVRKAEVREAKKVTLAPTEPIRFGRDFVEWLHERL
VGRPVVRGDYIKVGVLGQELTFVVTATQPSGVVQITEFTDFNISEKPVKEVEKRMTTGVT
YEDIGGLKDVIEKIREMIELPLKHPELFEKLGIEPPKGVLLYGPPGTGKTLLAKAVANEA
NAYFIAINGPEIMSKYYGESEERLREVFKEAEENAPAIIFIDEIDAIAPKRSEVTGEVEK
RVVAQLLALMDGLKSRGKVIVIGATNRPDALDPALRRPGRFDREIEVGVPDKKGRKEILQ
IHTRGMPIEPDFRKDDVLKVLKKLKEERKYLDVVNKAIERVSKAKEEEIPKVLKEISSEL
YDEVKTRLIDMLLDELAEVTHGFVGADLAALAREAAMAALRRLIKEGKIDFEAETIPREV
LDELKVTRADFYEALKMVEPSALREVLIEVPNVHWDDIGGLEEVKQELKEAVEWPLKYPE
AFRAYGITPPKGILLYGPPGTGKTLLAKAVATESEANFIAVRGPEILSKWVGESEKNIRE
IFRKARQAAPTVIFIDEIDAIAPRRGTDVNRVTDRIINQLLTEMDGIQENTGVVVIAATN
RPDILDPALLRPGRFDRLILVPAPDERARFEIFKVHTRNMPLGEDVDLRELARRTEGYTG
ADIAAVCREAAMIAMRKALEKGIITPEMKADEIRQKAKVTMKDFEEALKKIGPSVSKETM
EYYKRIQEQFKQARG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagaaggaggtcaagcttaaggtagcctcagcttatcaaagggatgtaggg
cgaggaatagttagattggatagaaaaacgatgagagagctaggaatatctccaggagac
gtcgttgagatcattggaacaaagaacacagcagccatagcatggccagcctatccagag
gatgaggggctagggataatcagaatggacggtacgataagaaagaacgctggagttggt
ttaggtgatgaagttacagtaaggaaagctgaggtcagggaagctaaaaaggttacgcta
gctccaactgaaccgataaggtttggaagggatttcgttgaatggctccatgagagatta
gttgggaggccagtggtcaggggagactacattaaagtcggagttcttggacaggagttg
accttcgttgttacggcaacccagccaagtggtgtcgttcaaataacggaattcacggac
tttaacatcagcgagaagccagttaaggaagtagagaagagaatgacaactggagtgacc
tatgaggacatcggtggactaaaggacgtcatagagaagataagggagatgatagaacta
ccactaaagcacccagaactgttcgagaagctaggaattgagcctcctaagggtgttctt
ctttatggtccgccgggtactggtaagacgctgttagctaaggctgtggctaatgaagct
aacgcttacttcatcgcgataaacgggccagagataatgagcaagtattatggagagagc
gaagagaggcttagagaggtattcaaggaggctgaggagaacgctccagcaataatattc
atagacgaaatagatgcaatagcaccaaagagaagtgaggttacaggtgaagtggagaag
agggtagtagctcagttactggccctaatggatggactgaagagcagaggtaaagtgata
gtcataggtgccaccaatagacctgatgctcttgatcctgctttgaggaggccgggtagg
tttgatagggagattgaggttggagtcccggacaagaagggcaggaaggaaatactccaa
atacacacaagaggaatgccaatagaaccagacttcagaaaggatgatgtgctgaaggtg
cttaagaagcttaaggaggagaggaaatacctagatgtagtgaacaaggctatagaaaga
gtatcaaaggctaaggaagaggagatcccaaaggtgctcaaagagataagctcagagctt
tatgatgaggttaagacaaggctaatagacatgctattagatgagcttgccgaggttacc
catggattcgtcggtgcagacctagctgccctggcaagagaagcggcaatggctgctcta
agaaggctaatcaaggaaggaaagattgactttgaggctgagaccataccaagggaagta
ttagatgagctcaaagtaactagagctgacttttatgaggctttgaagatggttgagcct
tctgctcttagggaggtgctcattgaggttccaaacgttcactgggacgacataggaggc
ctagaagaagtgaaacaggaattaaaggaggcggtagaatggccactcaaatatccagaa
gcgtttagggcctatggaattactccgcctaagggaatcctactgtatgggcctccagga
actggtaaaacgctgttagctaaggcagttgcaactgagagcgaggccaacttcatagcc
gttaggggtccagagatactcagcaagtgggttggagagagtgagaagaacatcagggag
atcttcaggaaggctaggcaagcagctccaactgtgatattcatagatgagatagatgca
atagctccaaggagaggcactgacgttaacagggtcactgacagaataatcaaccagcta
ttgacggagatggacggtatacaggagaacacaggagttgtcgtcatcgctgctactaat
aggcctgatattttggatcctgctttgttgaggcctgggcgttttgataggcttatactg
gttcctgctcctgatgagagggctaggtttgagattttcaaggttcatactaggaacatg
ccgttgggcgaggatgttgacttgagggaactggcaagaagaacagaaggctacacagga
gcagacatagcagcagtctgcagagaagcagcgatgattgcaatgagaaaggccctagaa
aagggaataataacgccagagatgaaagccgatgagataaggcagaaagctaaggtaacg
atgaaggactttgaggaagctctgaagaagataggtccttcagtcagcaaggagaccatg
gaatattacaagagaatacaagagcagttcaagcaggctagaggatga
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