Pyrococcus sp. NA2: PNA2_0570
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Entry
PNA2_0570 CDS
T01487
Name
(GenBank) ATP-dependent RNA helicase, putative
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
pyn
Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyn03019
]
PNA2_0570
Messenger RNA biogenesis [BR:
pyn03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
PNA2_0570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DEXQc_Suv3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AEC51486
UniProt:
F4HKY1
LinkDB
All DBs
Position
complement(488715..491282)
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AA seq
855 aa
AA seq
DB search
MLFVIREGKKKGELEAFIIENPPEKLSQIRNVKADRILRLIMRDGRLFKALEGSQYRNPK
EIEKLLRSSRIVLVNNAYEWEDYFKRRLMNKNIEKAELCRFCLLEGRITVLTEGNRIKYR
GEYICERCAEEELKNELRMRFNSLGMFEQAKRLLEKFRDLDKVLYAFDPRFDPTEHPEIT
KWDELKAKHVKVEKISIDDLDIPDALKNVLKLEGITELLPVQALAVKNGLLEGENLLVVS
ATASGKTLIGELAGIPKALQGKKMLFLVPLVALANQKYEDFRRKYSKLGLKVAIRVGMSR
IKTREEPVIVDTGIDADIIVGTYEGIDYLLRAGKKIGNVGTVIIDEIHMIDDEERGPRLD
GLIARLRKLYPKAQFIGLSATVGNPEELARSLGMKLVMYDERPVDLERHLVIARNEREKW
RFIAKLCKAEVARVSSKGFKGQTIVFTYSRKRCHELASFLTSKGLRAKPYHSGLPYKQRK
ITEMEFQAQMIDVVVTTAALGAGVDFPASQVIFESLAMGNKWLTVREFHQMLGRAGRPLY
HEKGKVYLIVEPGKKYSAQMEGTEDEIALKLLTSPIEPVIVEWSDEIEEDNVLAHACVFN
RLDVIEEVNSLTLGANRSAEKVLERLEELGMVKIRGNQVNVTPYGRAVSMSFLLPNEAEF
VRKNLETLDPLTISIHLLPFENAYLPGFLQREIESAVRGRISSNIFSSSFASILDELDKI
IPELSPSAADRLFLIYQDFFNCGEADCTEYAMEMVGKKIVELRREGNEPSKISEYFRKVY
GLIIYPGDIFTWLDGIVRKLEAVQRIASVFKKREVEETALVIKREIEEGRIFKHNDDNSK
RRGESWRREIGKREQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgtaataagagagggtaaaaagaaaggtgagcttgaggcctttatcatcgaa
aatcctcctgaaaaactttcgcaaattagaaatgtgaaagctgataggatcttaaggtta
ataatgcgagatggcaggttatttaaagcccttgaggggagccaatatagaaatccaaaa
gaaattgagaagttacttcgaagttctagaatagttcttgttaacaacgcctatgagtgg
gaggattatttcaagaggagactcatgaataagaacattgaaaaggctgagttatgcaga
ttctgtctcctggaagggagaattaccgttctgactgagggaaacaggataaagtatagg
ggggaatatatctgcgagaggtgcgcggaggaggagttaaagaacgaacttaggatgaga
tttaattccctcggaatgtttgaacaagctaaaaggcttttagagaaatttagagacctt
gataaagttctatatgcctttgacccaaggtttgacccgacggaacatcctgagataacc
aagtgggacgaactaaaagcaaagcatgtgaaggttgagaaaataagcattgacgattta
gatattccagatgctttaaagaacgttctgaagcttgaaggaataacggaactacttcca
gttcaggctttagccgtgaagaatggacttttagagggagaaaatcttctcgttgtttcg
gcaacggccagcggtaaaaccctcataggtgaattagctgggattccaaaggctttacag
ggaaagaaaatgctgtttctggttcctctggtagctctagctaatcaaaaatacgaggat
tttaggaggaagtactcaaaacttggcctgaaggttgcaataagggttgggatgagtaga
ataaagacgagagaagaaccagttatagttgatactgggatagatgccgacataatagtt
ggaacttacgagggtatagactatctgctgagggccgggaagaagatagggaacgttgga
actgtaatcatagatgagatccacatgatcgacgatgaggagagagggccaaggctcgat
ggattaatagctaggctgagaaagctttatcctaaggcccaattcataggactctctgca
accgttggtaatccggaggagttagctaggtcgcttggaatgaagctcgtaatgtacgat
gagagacccgtggatttggagagacatctagtaatagcaaggaacgagagggagaaatgg
aggttcatagcaaaattgtgtaaggctgaagttgcaagagttagttcaaaagggttcaag
ggacagacgatagtcttcacttattccaggaagagatgccacgagttagcatccttctta
acgagcaaaggattaagggctaagccctaccactctggattgccttataagcagaggaag
ataactgaaatggagttccaggcccaaatgatagatgttgttgttacgacggctgcctta
ggtgcaggcgttgactttccggcctctcaggttatcttcgagagtcttgcaatgggaaac
aagtggctcacggttagggagttccaccagatgctcggaagggctggaagacctctgtat
catgagaagggtaaggtatacttaatcgtcgagccagggaagaaatattcagcccaaatg
gaaggaacagaggatgaaattgctctaaaattgcttacatctccaatagaacccgttata
gtggaatggagtgatgaaatagaggaggacaatgttcttgcacatgcctgcgtcttcaac
aggcttgatgtgatagaggaggtaaattccctcactctaggtgcgaacaggagtgccgag
aaagttctcgagagacttgaagaattaggtatggtcaagattagagggaatcaagtaaat
gtaactccatatggaagggctgtaagcatgagctttctacttccgaatgaagcagagttt
gtaaggaaaaatttggagaccctagatccgttgacgatatcaatccatctcctcccattt
gagaatgcctaccttccgggctttctgcagagggagattgaatcggccgttaggggaaga
ataagttcgaatatcttttcaagctcatttgcatccatactagatgagctggacaagata
attccggagttaagtccaagtgcagcagataggctgttcttaatataccaagatttcttc
aactgcggtgaagcggattgcactgaatatgcaatggaaatggttgggaagaagatagtc
gagctgagaagggaaggcaatgagccatccaaaatctctgaatatttcagaaaagtttat
ggcctgattatataccctggggatatattcacatggttagatggaattgttagaaagctt
gaagccgttcagaggatagcgagcgtctttaagaagagagaggtcgaagaaacggccctt
gttattaagagagaaatagaggaaggcagaatatttaaacacaatgatgataactccaag
aggaggggagagagttggaggagggaaattggaaaaagagaacagtaa
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