Pyrococcus sp. NA2: PNA2_0910
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Entry
PNA2_0910 CDS
T01487
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pyn
Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyn03016
]
PNA2_0910
Enzymes [BR:
pyn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PNA2_0910
Transfer RNA biogenesis [BR:
pyn03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PNA2_0910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
AEC51826
LinkDB
All DBs
Position
complement(822211..822723)
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AA seq
170 aa
AA seq
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MKKVIEFYLSGDRVYSTREKAINQLYNNRGYGELKGNKLFLSLIEAAYLTERGWIQVLDG
NRELSFEDIVNIGRKKDEDFDIKYIVYKDLRDRGYIVKSALKFGSHFRVYRKGAEHSDWL
IWVLRESEKLRPNDITARVRVAHGVRKNMIMAIVDEDNDVVYYKVEWVKF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtcatagaattttaccttagtggagacagagtttacagtaccagagagaag
gcaataaaccagctctataacaataggggatatggagagctgaaggggaataaactgttt
ctctctctcatagaggccgcctacttaactgagagaggatggattcaagttcttgacggg
aatagagagctatcctttgaagacatcgtaaacattggaaggaaaaaggatgaggatttt
gacataaagtacatcgtttacaaggatctcagggataggggatacatagttaagtccgcc
ttaaagtttggttcccactttagggtttataggaaaggagcagagcattctgattggctg
atatgggttcttagagagagcgaaaagttgaggccgaatgatataacggcaagggtcagg
gtagcacatggggttagaaagaacatgataatggcaatcgtcgatgaggacaatgatgtt
gtatactataaagtggagtgggtaaagttctaa
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