KEGG   Pyrococcus sp. NA2: PNA2_1797
Entry
PNA2_1797         CDS       T01487                                 
Name
(GenBank) putative protein ATP-dependent helicase LHR
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pyn  Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:pyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyn03400]
    PNA2_1797
Enzymes [BR:pyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PNA2_1797
    5.6.2.6  RNA 3'-5' helicase
     PNA2_1797
DNA repair and recombination proteins [BR:pyn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PNA2_1797
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Intein_splicing ResIII LAGLIDADG_3 Cas3-like_C_2 PARG_cat_N
Other DBs
NCBI-ProteinID: AEC52712
UniProt: F4HL31
LinkDB
Position
1671247..1674735
AA seq 1162 aa
MERIRWAEREYKDEEIYAILDPIVREWFRRKFKSFTPPQRYAIVEIHKGENVLISSPTGS
GKTLSAFLAIISELISLGRRGKLEDKIYCVYVSPLRALNNDIRRNLEEPLNEIIELAREL
KEEIPEIRVSVRTSDTSSYEKSKMLKKPPHILITTPESLAIAINAPKFREKLRDVKWVIV
DEVHALAENKRGSHLTLTLERLRELCGRDFVRIGLSATIHPLEEVAKFVFGFDDKGNPRP
GLIVDVSFAKKTEIRVESVVEDLIYTPANVLSETLYRRLGELIRKHRTTLIFTNTRSGAE
RVAYHLKKMFPEWEDKIEAHHSSLSREVRLDVEEKLKRGELKAVVCVPGHSIVFTPIGIK
RIDELDNEDQVLGIKNAKGDFVKFGGVQKIEYNSKGVRIRTRLGFEVEATLEHKFLTMKN
GQLIWREARELKPGDYVGIIRKLPELEDETLSKKFTPELARLLGFYLANGSKQMNVYDKL
GKERPDLTSLKLEVLPLLSREHKIQFLSGYFDGNGYITKNEVGFILSDPKHIEVIRSILL
QFGIIPSISGNKLKIPGGESFKRFKEIIDPWRDDLKEVKILDIQGEELTKGDILFDKIEE
IEETFIGEAYGIIDSETGNYVVNYFISKNSSTSLELGIDIGTIDLVVLIGSPKSVNRALQ
RIGRAGHKLHEVSKGIILALDRDDLVEVTVLAHNARNRRLDRIKIPKNPLDVLVQHLLGM
ALERVWDVNEAYKVVRRAYPFRDLPFEDFMNVLKYLAGEYAGLEERKVYAKIWLENGKFG
RRGKMTRAIYYMNTGTIPDEAKIDVFTMDKRYIGTVEEEFAERLMPGDIFVLAGRTYEFV
KSKGNRIYVIPREGAKPTIPSWFSEMLPLSFDLALDIQRFRREVKAILNNKRAESFLMKK
YGIDRMTAKAILSYFREQAKYSIIPDDETILVEIVEDGMVVKYFFHTLIGRRANDALSRA
FAYLISRKKKCNVGMAITDNGFMLKVPRSKALTEAEILELFNIENLRDVLMKALENTELL
KRRFRHVANRGLLILRRYMGKKKSLSKQQMNAQTLLNFLKKNYPDFPLLKEVYREIMEDK
MDIENAELFLRWIKEGKIKVIVKRHPYPSPFAFNLEVVGASDVVLMEDRRELIKELHKKI
MELIKEGGVPSPTAPRSPFAGV
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggagagaataagatgggccgaaagagaatacaaggatgaagagatatatgcgatcctc
gatccaatagttagggagtggtttagaaggaagttcaaatcattcacaccgcctcagagg
tatgcgatagttgaaatccacaaaggagaaaacgttttgatatcctcaccaaccggttca
ggcaagactctctcggctttcctagctataatcagtgaattaatatccctgggaaggaga
ggcaaacttgaggacaaaatatattgtgtctacgtttctcctctcagggctctaaataat
gacataagaaggaatctagaagaaccgttaaatgagataatagagttagcgagagaactt
aaagaggaaattccagaaatcagagtaagtgtcagaacgagcgatacaagcagttatgaa
aagagtaagatgttaaagaagccccctcacattttaataacaactccagagagcctagcc
atagcaattaatgcccctaagtttagagagaaactgagagacgtaaagtgggtcatagtt
gatgaagttcatgcactagctgagaataaaaggggatcacacctaacgttaacccttgaa
aggttgagagaactatgcgggagggacttcgtaagaatagggttaagtgcaacaattcat
cccttggaagaagttgcaaagttcgtatttggctttgatgacaaaggaaatccaagacca
ggattgatagttgatgttagctttgctaagaagaccgaaataagagttgaaagcgttgtg
gaggatctgatatacactcctgcaaacgttctaagtgagaccctctaccgtagacttggc
gagctcataaggaaacatagaacaactttaatattcaccaacaccaggagtggagctgag
agagtagcttatcatttaaagaagatgtttccagagtgggaggataaaattgaagctcat
cactcttctctgtctagagaagttcgtttggatgttgaagaaaaattaaaaagaggcgaa
ttaaaggccgtagtttgtgtccctgggcactcaattgtctttactccaattgggattaaa
agaattgacgaacttgacaacgaggatcaagttctcggtattaaaaacgccaagggagat
ttcgtcaaattcggtggagtccaaaaaatcgagtacaattcaaagggggtcaggataaga
acgaggcttggctttgaagtagaggcaaccctagagcataagttcctaacgatgaagaat
gggcaactaatatggagggaggcaagagagcttaagccaggagactacgtagggataatt
aggaagctacctgagcttgaggatgaaaccctatcaaagaaatttacgcctgaactagct
aggttattgggcttttatcttgctaacggttcaaagcaaatgaacgtttatgacaagctt
ggcaaagaaagaccagaccttacatccttaaaactggaggtattacccctcctctcaagg
gaacacaaaatacagttcctctcaggatattttgatggtaatggatacatcaccaagaac
gaagttgggttcatattatcagatccaaagcacatcgaggtcataaggagtatcttactt
caatttgggataataccttcaataagcggaaacaaactgaaaatccctggtggagaatcc
ttcaagaggtttaaagaaattatagatccctggagggatgatcttaaggaagttaagatt
ctcgatatacaaggtgaggaacttacaaagggtgacattctctttgataagatagaagag
atagaggagacattcattggagaggcctacggaatcatagactctgaaactggaaattat
gtggttaattacttcatatcaaagaatagctcaacgagtctagaacttggaatagacata
ggaacaatagacttggtggttctcataggctcgccaaagagcgttaacagggccttacag
aggataggaagggctggacataaacttcatgaggttagtaagggaataatccttgcttta
gaccgtgatgatctcgttgaggtcaccgttttggcacacaacgcaaggaataggagactt
gacagaatcaagattccaaagaacccactcgatgttcttgtccaacatcttctcgggatg
gcccttgagagagtttgggatgtcaatgaggcgtataaagtagttaggagggcatatcca
tttagggatcttccatttgaggactttatgaacgttctcaagtatctagctggggaatat
gctggcttggaagagaggaaagtttatgctaagatatggctcgagaatggaaaatttgga
agaagaggaaagatgacaagggccatatattacatgaatacgggaacaattccagatgag
gccaaaatagatgtcttcacaatggacaagagatacataggaacagttgaagaggagttt
gcagaaagattaatgcctggagacatctttgtattagctggaagaacttatgaattcgtt
aaaagcaagggaaatagaatatacgttattcccagggaaggagcaaaacctacaatccct
tcatggttctccgagatgttaccccttagttttgatttagcattagatatccagagattt
aggagagaagtaaaggcaatattgaacaataagagagccgaatcattcctgatgaagaag
tatggaatagacaggatgactgccaaagctatactctcttacttcagggaacaagcaaaa
tattcaataatcccagacgatgaaactattctagttgagatagttgaagatggaatggtc
gttaagtacttcttccatactttaataggtaggagagcaaatgatgccttgagtagagcc
tttgcatacctaataagcaggaagaagaaatgtaatgtgggcatggcaataactgacaat
gggtttatgctgaaagttccgaggagcaaagctctaaccgaggcagagatacttgagttg
ttcaacatcgaaaatttgagagatgtactaatgaaagcccttgagaatacggagctcctg
aagaggagatttaggcatgtggccaacaggggtctactcatattgaggagatacatggga
aagaaaaagagtttgagtaaacagcagatgaacgcacagactcttcttaactttctaaag
aaaaattatccagacttcccgctcctcaaagaggtttacagagaaataatggaggataag
atggacatagaaaacgcagagctattcctgagatggataaaggaggggaagattaaggtg
attgtcaagagacatccatatccaagtcctttcgcctttaaccttgaagttgttggagcg
agtgacgtcgtactcatggaggacaggagagagctgataaaggagttacacaagaagatc
atggaactaataaaggagggaggtgtcccctccccgaccgccccccggtcacctttcgcg
ggggtgtga

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