KEGG   Pyrococcus sp. NA2: PNA2_1910
Entry
PNA2_1910         CDS       T01487                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pyn  Pyrococcus sp. NA2
Brite
KEGG Orthology (KO) [BR:pyn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pyn03400]
    PNA2_1910
Enzymes [BR:pyn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PNA2_1910
    5.6.2.6  RNA 3'-5' helicase
     PNA2_1910
DNA repair and recombination proteins [BR:pyn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PNA2_1910
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc WHD_Lhr ResIII Cas3-like_C_2 DUF7836 DEXQc_Suv3 AAA_11 Zn_ribbon_8 HypA AAA_30 SPO1_gp41 DUF4379 Zn_ribbon_double Zn_ribbon_4 SNF2-rel_dom
Other DBs
NCBI-ProteinID: AEC52824
LinkDB
Position
1784701..1787442
AA seq 913 aa
MHILLKKAIKEKFGKLNKLQIEAFKRIVRDRNSTLIIAPTGSGKTEAAILPVLNAILEEN
LSPITCLYIAPIKALNRDLLDRLKWWEEKTGIRIEVRHGDTPQSKRSKQVRSPPHVLITT
PETLPAILTTKSLRPYLKNVKFVIVDEITELVDNKRGAQLILNLKRLSLIADFIRIGLSA
TVGNEEEIRRWLDADVVIKPTLKKRYKFKVLFPQPDEKDREIAEKLNVPLEVATRLRVLW
NIVEEYKRALIFVNTRQFAEILGHRLKAWGKPVEVHHGSLSKEARIEAERKLKEGKIKAL
ICTSSMELGIDIGDIDVVIQYMSPRQVNRLIQRAGRSRHRLWEVSEAYIITTGIEDYLQS
LVIAKRALEGKLERIKPYENALDVLAHFIVGLLIEYREIPVVEPYKLARETYPYRNLSWE
DYVEVVRTLEEARIVKIREGKLKLGSKAFKYYFENLSTIPDEMSYKVIDIVSGKVIGRLD
ENFVMDLEEGLEFITRGRTWLVLEINGEEAIIKVRESENIEGAIPSWEGELIPVPKEVAV
EVGKLRRELVYDIKRAKKLIEGVEYVDEELELVRNELLKQELVPSDRDVVINVLPNMTII
HSDQGNKVNEGLARYILALLSLKYGNIFSIRAYAHAIIISSPFRMNPAEIQEMLISGELV
NDAIIRALRGSTAYRWKMINVAKRMGAIKKNARIKRIERLFEGTIIEKETLNEIFHDKID
ISGLHEVLKKIKRGEIRIRGKIIEEPTDLDLEYLKFGGEFLLTTPLQKEEVETIFREKLL
ETTLEVVCTNCGFSWETKVRRIIDRLNDLKCPKCGSLMLAPLHPKDAEAFKLALNKIRSG
RKLSSREERAYIRGLKASDLLRNYGKDALLALATYGVGVETASRLLSRVSQNVLIRELMK
LERQYIRTRKFWD
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgcacatcctactaaagaaagctatcaaagaaaagtttgggaaattaaacaagcttcaa
atagaggcctttaaaagaatagtacgagacaggaatagcacccttatcatagctcctact
ggaagtggtaaaacagaggccgccatcttacctgtcttaaatgcgatcttagaggagaat
ttatcacccataacttgtttgtatatagccccaattaaggcattaaatagggatctcctt
gatagattaaaatggtgggaagaaaagactggaataaggatagaagttagacatggagac
actcctcaatctaaaagaagtaaacaagttagaagtcctcctcatgtcttaataacaact
cccgaaactttacctgcgatattgacaacaaagtcacttagaccatatttaaagaatgtg
aagttcgtgatcgttgatgaaataactgaactcgttgataataaaagaggtgcccagctt
attctgaatttgaagagactctctctaatcgcagatttcataaggattggactatcggca
accgttggtaatgaggaggagattaggagatggctagatgccgatgtagttataaaacca
acgcttaagaagagatacaagtttaaagttctttttcctcaacccgacgaaaaagatagg
gagattgcagagaagcttaacgttccattggaggtggcaactaggcttagagtattgtgg
aatatcgttgaagaatacaaaagagccttgatctttgttaatacgagacaatttgctgag
atcctcggtcatagactaaaggcttggggaaaaccagttgaagttcaccatggtagtctt
tcgaaggaggcaaggatagaggctgaaagaaagctaaaagaaggtaaaataaaggctcta
atttgcacttcatcaatggaactcggaattgacataggagatattgacgttgttatccaa
tatatgagcccaagacaagttaacaggctaattcagagagctggaagaagtaggcataga
ttatgggaagttagtgaagcatatatcatcaccacgggaattgaggattatctccaaagt
ctagtaatagctaagagggccctagagggaaagctcgaaagaattaaaccctacgaaaat
gcactggatgtccttgctcacttcatagttggattgttaatcgaatacagagaaataccg
gtagtagagccttataaacttgcaagagaaacttacccgtatagaaatctcagttgggag
gactatgttgaagttgtgagaacccttgaagaggcgagaatcgtaaagatcagagaaggg
aaacttaagcttggaagtaaagctttcaagtattactttgaaaatctatcaacaattcca
gatgagatgagctataaggtcatagacatcgtttctggaaaggtcattggtagacttgat
gagaattttgtcatggatctagaggaaggtctagagtttataacgcgtggaaggacgtgg
ttagttctcgagattaacggagaagaggcgataattaaagtgagagagagtgaaaacata
gaaggggcgataccaagttgggaaggagaattaattccagtcccgaaagaagttgcagtg
gaagtgggcaaacttaggagagagctagtttatgacataaaaagggcaaaaaagttaatt
gagggcgttgaatacgttgatgaagagttagagttagttagaaacgaactcctcaaacaa
gaactagttccaagcgatagagatgttgtgattaatgttctgccaaacatgacaattatt
cactctgaccagggaaacaaagttaatgagggacttgcaagatatatactggctctcctc
tccctaaagtatggaaacatattctcaataagagcctatgcacatgcgataataatatca
tcaccctttagaatgaaccctgctgaaatccaagaaatgctaataagtggggaattagtt
aacgatgcaattataagagcacttagaggaagcacagcctatagatggaaaatgataaac
gttgcaaagaggatgggtgccatcaagaagaatgcaaggattaagaggattgaaaggttg
tttgagggtaccataatagaaaaggagacactaaatgaaatattccacgataagatagat
atcagtgggttgcatgaggtattgaagaagatcaagaggggagagataaggatcagggga
aagatcattgaagaaccaacggatcttgatttagaatacttaaaattcggaggggagttt
ttacttacaactcccctacagaaggaggaagttgagacaatattcagagaaaaattgctc
gaaacaacgttagaagttgtatgtactaactgcgggttctcctgggagacaaaagttagg
aggattatagatagactaaatgacctcaaatgtcctaaatgtggctcactaatgcttgct
ccacttcatccgaaggatgcagaggccttcaaattagcactaaacaaaattagaagtgga
aggaaattatcaagcagggaagaaagggcatatattaggggtctaaaggcctccgattta
ctgagaaattacggaaaagatgcattattagcattagcaacttatggagtaggagttgaa
accgcatcgaggttactttctagagtatcacaaaatgtattaataagggaactaatgaaa
ctagaaaggcaatacataagaacaaggaagttctgggactag

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