Plasmodium yoelii: PY17X_0307400
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Entry
PY17X_0307400 CDS
T01035
Name
(RefSeq) ATP-dependent RNA helicase UAP56, putative
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03013
Nucleocytoplasmic transport
pyo03015
mRNA surveillance pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_0307400
09122 Translation
03013 Nucleocytoplasmic transport
PY17X_0307400
03015 mRNA surveillance pathway
PY17X_0307400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_0307400
03041 Spliceosome [BR:
pyo03041
]
PY17X_0307400
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PY17X_0307400
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PY17X_0307400
Spliceosome [BR:
pyo03041
]
Complex C
Other components
EJC/TREX
PY17X_0307400
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PY17X_0307400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Utp25_C
Motif
Other DBs
NCBI-GeneID:
3830401
NCBI-ProteinID:
XP_731176
UniProt:
A0A077Y0S7
Q7RSM9
LinkDB
All DBs
Position
3:complement(join(294591..295705,295814..296099))
Genome browser
AA seq
466 aa
AA seq
DB search
MAAIDHNVQDELVDYEDDDNMLDNKDVKGDIGGNLLNNNNKGVNDSGAMRGSYATVHTGG
FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ
LETNDSKDIKEEKDMNNANGDMNQNSGSQNKYVRCLGIAHTRELAYQIKNEFDRFSKYLK
NVRCEVVYGGISMNKHVVLFKGNNIPHIIIGTPGRILALIREKYMLTDKIQHFVLDECDK
CLERLDMRGDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLH
GLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSISIHGG
LNQEERIERYDKFKKFENRILVSTDLFGRGIDIERINIVINYDMPENSDSYLHRVGRAGR
FGTKGLAITFVSSQEDTLALNEVQTRFEVAISEMPNKIDCNEYINQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatagatcataatgttcaagatgagttagtagattacgaagatgatgataac
atgttagataataaggatgtcaaaggtgacatcggaggtaaccttttaaacaacaataat
aaaggagttaatgacagtggtgctatgagaggtagttatgctactgttcatactggaggg
tttaaagatttttttttaaaaccagaattattaagagcaattagcgaaagtggatttgaa
catccatctgaggtacaacaagaaactataccagcagcaataacaggtaccgatatttta
tgtcaagcaaagagtggtatgggaaaaactgctgttttcgttttatcaattttacaacaa
cttgaaactaatgatagcaaagatataaaagaagaaaaggatatgaacaatgctaatgga
gatatgaatcagaatagcggttctcaaaataaatatgttagatgtttaggtatagcacat
actcgtgaattagcttatcaaataaaaaacgaatttgatagatttagcaaatatttaaaa
aatgttagatgtgaagttgtttatggtggtatatctatgaataagcatgtagtcttattc
aaaggaaataatatacctcatataattattggtacacctggtcgtatattagcattaatt
agagaaaaatatatgttaacagataagattcaacattttgttttagatgaatgtgataaa
tgtttagaaagattagatatgagaggggatgtacagaaaatttttatttctactccttta
aaaaaacaagttatgtttttttcagcaactatggcaaaagaaatgagagatgtatgcaaa
aagtttttacaaaaccctgtagaaatatttattgatgatgaagctaagttaaaattacac
gggctattacaacattatgttaaattacaagaaaaagataaaacaagaaaattaatagaa
atattagatgctttagaatttaatcaagttataatttttgttaaatctgttacaagagct
atcacactagacaaattattaacagagtgcaatttcccatccatatctatacatggtggt
ttaaatcaagaagaaagaattgaaagatatgataaatttaaaaagtttgaaaacagaata
ttagtatccactgatttatttggaagaggtattgatattgaaagaataaacatcgttatt
aattatgatatgccagaaaattcagattcttatttacacagagttggaagagctggaaga
tttggtacaaaaggtttagctattacttttgtatcttctcaagaagatacattagcctta
aatgaagtacaaaccagatttgaggtagctatttctgaaatgccaaataaaatagattgt
aacgaatatattaaccagtaa
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