Plasmodium yoelii: PY17X_0515200
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Entry
PY17X_0515200 CDS
T01035
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PY17X_0515200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pyo03041
]
PY17X_0515200
Enzymes [BR:
pyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PY17X_0515200
Spliceosome [BR:
pyo03041
]
Complex C
Other components
Step II factors
PY17X_0515200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
S1
nSTAND3
AAA_19
PhoH
Sigma54_activ_2
T2SSE
nSTAND_NTPase5
GIPC1_GH2
TsaE
Chorion_3
OB_RRP5_4th
AAA_16
Motif
Other DBs
NCBI-GeneID:
3789687
NCBI-ProteinID:
XP_022811682
UniProt:
A0A077Y259
LinkDB
All DBs
Position
5:complement(join(714150..715592,715837..715965,716320..716376,716506..718461))
Genome browser
AA seq
1194 aa
AA seq
DB search
MDGLKKINLIQKINEKLYDHLGIEDDNLTEFLIFLCEKSTCLEEFCKEVFENGGEIEQSV
LKNIYNLIKQSNTEINDDKNVNKQSVGNGKDSNYNHVSKEIQQIEKKNEKMKKFGCLSIK
NTTNLPPLTDQSSEEEEEEKGGGKGEKYKNKGRDKDREEEKGEKLADKDRGRDRDRGKRK
DKDRDNWADREDKKSRESKYGSDDVRNIKKVKYDENSEDDYRALKINNIFSGKIKKITDF
GMFVSFKTREGYKEGLVHITDIEKNNKRINLNDKFKRNMIVKVKIKGIFGEKISLNMSEV
DQKTGKNLANNNKEENNDENKTCYFGNNDDNEFKHKKNKNKNNKYYEHLDDPKEAIKYES
VIKMKSDYSKWEIQQLIKSGIVYDENIKNEYKNLKNEEKIDDEEEIIEIEVSEKEPNFLK
GQTTKAGANLSPIQIIVNSEGTLAKAITTTSALTKERKEQKKNEQNALFDSIPKDISRPW
EDPNPNLGERTIAEALKNVGKNYDLPDWKKNYINNNISIGIKNPLPLTEQREKLPIYNLK
QDLMKAIKKNNVLIVIGETGSGKTTQIPQYLHEAKYTEHGIVGCTQPRRVAAMSIAKRVS
EEFGCILGQEVGYSIRFDDCTSTDTIIKYLTDGMLLREALSDTMLSRYSFIILDEAHERT
ISTDILFCLLKDVIKKRSDFKLIVTSATLDAEKFSAYFFNSPIFTIPGKIFPVEILHSKE
PESDYVEACLITVLNIHLNEHPGDILVFLTGQEEINTACEILHERMKKLENMSPPPLIIL
PIYSSLPSEMQSIIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD
MDSLIIAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMAETSVPEIQRINLGSIVL
LLKALGVNDFLHFDFMDSPSIETLIYSLESLYYLGALDDNGYLTKLGKKMSNFPMEPNLS
KILLTSINFNCTDDICTIVSMISVQNIFYRPQNKILLADKKKNKFIMPQGDLITYLNIYN
KWKENSFSNYWCHENFIQSRALKRAQDVRKQLLSIFEKYNYQVKKRENDISNSTNYVNIC
KSICSGYFNHVCKRDNQQGYTTLLTNQQVFIHPSSTLFSKNPLFVVYHELVLTNKEYIRD
CTIIQPQWLIQLAPNLFIPADEKKISKIKLREKIEPLHNYYEEPNAWRLSRRKG
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatgggttaaagaaaataaatttgattcaaaaaataaatgaaaagttatatgaccat
ttaggaatcgaagatgataatttaacagaatttttaatttttttatgtgagaaatctaca
tgtttagaagagttttgtaaggaggtctttgaaaatggtggagagatcgaacaatcagtg
cttaaaaatatttacaatttaataaaacaatcaaacactgaaataaatgatgataaaaat
gttaataaacaatctgtgggaaatggaaaggacagcaattataatcatgtttcaaaagaa
attcaacaaatcgaaaaaaaaaatgaaaaaatgaaaaagtttggatgcttatcaattaaa
aacaccaccaatctgccccccctcactgaccagagtagcgaagaagaagaagaagaaaag
ggggggggaaagggggaaaagtacaaaaacaagggcagggacaaggacagggaagaagaa
aagggggaaaagttggcagacaaggacaggggcagagacagggacaggggcaagaggaaa
gacaaggacagagacaattgggcagaccgagaggacaaaaagagtagagaatcgaaatat
gggtcggatgatgtaagaaatataaagaaagtaaaatacgacgaaaatagtgaagatgat
tatagagcattaaaaattaataatatatttagtgggaaaataaaaaagattacagatttt
ggaatgtttgtttcgtttaaaacgagagaaggatataaagaagggttagtacatataaca
gatattgaaaaaaataataaaagaataaatttaaatgataaatttaaaaggaatatgatt
gttaaagttaaaataaaaggaatatttggggaaaaaattagtttaaatatgtcggaggtt
gatcaaaaaactggtaaaaatttagctaataataataaggaagaaaataatgatgaaaat
aaaacatgttattttggtaataatgatgataatgaatttaaacataaaaaaaataaaaat
aaaaataataaatattatgaacatttggatgatccaaaagaagcaataaaatatgaaagt
gtgataaaaatgaaaagtgattattcaaaatgggaaatacaacaattaataaaaagtgga
atagtatatgatgaaaatataaaaaatgaatataaaaatttaaaaaatgaagaaaaaata
gatgatgaagaagaaattattgaaatagaagttagtgaaaaagaacccaattttttaaaa
ggtcaaactacaaaagcaggtgcaaatttatcacctatacaaattattgtaaacagtgaa
ggaacattagctaaagcaataacaacaacatcagcattaactaaagaaagaaaagaacaa
aaaaaaaatgaacaaaatgcactttttgattctatacctaaagatataagtagaccttgg
gaagatcctaatccaaatttaggagaaagaacaatagcagaagcattaaaaaatgtcgga
aaaaattatgatttaccagattggaaaaaaaattatataaataataatatttcaattggt
atcaaaaatccattacctttaactgaacaaagagaaaaattacctatttataatttaaaa
caagatttaatgaaagctataaaaaaaaataatgttcttatagttattggtgagacagga
agtgggaaaacaacacaaatacctcaatatttacatgaagccaaatatacagaacatggg
attgtaggatgcacacaaccaagaagagttgctgctatgtcaattgcaaaaagagtcagt
gaagaatttggttgcatattaggacaagaagttggatactctatacgttttgatgattgc
acttctaccgatactataattaaatatttaacggatggtatgcttttaagagaagcccta
agtgacactatgctttccagatactcttttataatacttgatgaggctcacgaaagaaca
atctcaacggatattctgttttgtctcctaaaggatgttattaaaaagagatctgatttc
aaactcatcgtcacatctgctactttagatgcagaaaaattctcagcgtactttttcaat
tctcccatttttacaattccaggaaaaatctttccagtcgagatcctgcattctaaggaa
cccgaaagtgattacgtagaggcatgtctgatcacagttttaaatatccacttaaatgag
catcctggagatattttagtatttttgacaggacaagaagaaattaatacagcttgtgaa
atattacatgaacgtatgaaaaagttagaaaatatgtctccaccacctttaattatatta
ccaatatattcatcacttccatcagaaatgcagagtatcatatttgagcctgcaccacca
ggatgtagaaaatgtatattagcaacaaacatagcagaagctagtttaacaatagatggt
atattttttgtaatagatcctggattttgtaaaataaaaaaatatgattctaaaagagat
atggattcattaataattgctccaatatctaaagcaaatgctaaacaaagagcaggtagg
gctggtagaactgggcctgggaaatgttatcggctttatactgaagaggcttataaaaat
gaaatggcagaaactagtgttccagaaatacaacgaataaatttaggaagcatagtatta
ttattaaaagcattaggtgttaatgattttttacattttgattttatggattctccatct
attgaaacgcttatatattctctagaaagcttatattatttaggggcattagatgataat
ggatatttaactaaattaggaaaaaaaatgtcaaattttccaatggaacctaatttatct
aaaattttattaacatctattaattttaattgtactgatgatatatgtactattgttagt
atgatcagtgttcagaatattttttatagacctcaaaataaaattttattagctgataaa
aaaaaaaataaatttataatgccacaaggagatctaataacatatttaaatatttataat
aaatggaaagaaaatagtttttcaaattattggtgtcatgaaaattttattcaatcaaga
gcattaaaacgggctcaagatgttagaaaacagttgttatctatttttgaaaaatataat
tatcaagttaaaaaaagagaaaatgatattagcaattctacgaattatgttaatatatgt
aaaagtatatgttcaggatattttaaccatgtatgtaaaagagataatcaacaaggatat
acaacattattaacaaatcagcaagtttttatacatccatcttcaactctttttagtaaa
aacccattatttgttgtatatcatgaacttgttttaaccaataaagaatacataagagat
tgtacaataattcagcctcaatggctaatacaattagcacctaacttatttataccagct
gatgaaaaaaaaatatcaaaaattaaacttcgagaaaagatcgaaccattacataattat
tatgaggaacctaatgcttggcgattatctcgaagaaaaggataa
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